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Hi there 👋

I'm Hasan, a Postgrad Researcher at Yale School of Medicine in New Haven, CT 🇺🇸.

Previously @SciLifeLab, @Karolinska, @KTH, @SU in Stockholm, Sweden 🇸🇪.

  • 🧠 I’m currently working on understanding the multi-omic (genomic/transcriptomic/epigenetic) profiles of various tumors through computational methods
  • 💬 Ask me about bioinformatics applications on healthcare problems
  • ⚡️ I’m looking to collaborate on bioinformatics and computational biology projects
  • ⏳ I'm learning web-development (HTML/CSS)
  • 👨🏻‍💻 Languages: R, Python, Bash, Matlab, SQL
  • 📍 🇺🇸 | 🇸🇪 | 🇪🇸 | 🇹🇷

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Hasan Alanya's Projects

gatk icon gatk

Official code repository for GATK versions 4 and up

genetech icon genetech

material related to the genetech courses

ggplot2 icon ggplot2

An implementation of the Grammar of Graphics in R

hisat2 icon hisat2

Graph-based alignment (Hierarchical Graph FM index)

icons icon icons

R package to easily insert web icons to RMarkdown

master-thesis icon master-thesis

A gene co-expression network-based analysis of muscle tissue to reveal novel genes and molecular pathways underlying sarcopenia

mnp_training icon mnp_training

DNA methylation-based classification of central nervous system tumours

multidl icon multidl

Download multiple files in parallel

music icon music

Multi-subject Single Cell Deconvolution

nextflow icon nextflow

A DSL for data-driven computational pipelines

personal-website icon personal-website

Code that'll help you kickstart a personal website that showcases your work as a software developer.

phd2020 icon phd2020

PhD Course 2020 Systems Biology of Human Metabolism and Gut Microbiome (3 ECTS)

rnbeads icon rnbeads

This is a read-only mirror of the Bioconductor SVN repository. Package Homepage: http://bioconductor.org/packages/devel/bioc/html/RnBeads.html Bug Reports: https://support.bioconductor.org/p/new/post/?tag_val=RnBeads.

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