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Name: Gregory Schwartz
Type: User
Gregory Schwartz's Projects
gregoryschwartz.github.io
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haskell-eigen
Haskel binding for Eigen library. Eigen is a C++ template library for linear algebra: matrices, vectors, numerical solvers, and related algorithms.
haskell-pipes-library
Compositional pipelines
haskell-turtle-library
Shell programming, Haskell style
hawk
Haskell text processor for the command-line
heatitup
Find and annotate ITDs using suffix trees and characterize the exogenous segments within the spacer using heat diffusion.
heatitup-complete
Find and annotate ITDs with assembly or read pair joining using suffix trees and characterize the exogenous segments within the spacer using heat diffusion. A layer on top of heatitup for additional functionality such as working with BAM files directly.
hierarchical-clustering-diagrams
Draw diagrams of dendrograms made by hierarchical-clustering.
hierarchical-spectral-clustering
Hierarchical spectral clustering of a graph.
hvega
Create Vega-Lite visualizations from Haskell.
hvega-theme
A professional theme for publication quality figures.
identify-public
Count the number of files sequences appear in and add that number to the header of each sequence.
ihaskell
A Haskell kernel for IPython.
integreat
Integrate difference data sources and optionally perform differential integration.
journal_title_abbreviations
Journal title abbreviations file to be used with pandoc-citeproc
labmate-to-sanity
Takes in a csv file and returns a cleaned and correctly formatted csv file.
lineage
Create a lineage tree from a fasta file using shared mutations
matrix-market-attoparsec
Attoparsec parsers for the NIST Matrix Market format
modify-fasta
Modify fasta (and CLIP) files in several ways.
modularity
Find the modularity of a network.
mopidy-spotify
Mopidy extension for playing music from Spotify
multiomics-single-cell-t1d
Supplementary code for paper
nixpkgs
Nix Packages collection
normalize
normalize
org-reveal
Exports Org-mode contents to Reveal.js HTML presentation.
ox-hugo
A carefully crafted Org exporter back-end for Hugo
ox-latex-subfigure
Turn table into subfigure. More or less a hack atm, easy to incorporate to org-mode though
palette
Tools for creating color schemes.
pdf2pptx
Convert your (Beamer) PDF slides to (Powerpoint) PPTX
ploterific
Basic plotting of tabular data for the command line.
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