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aichemist-copier-template

Copier template as shown in the AIDD/AIChemist spring school.

alphalink2

AlphaLink2: Integrating crosslinking MS data into Uni-Fold-Multimer

arden

Artificial Reference Driven Estimation of false positives in NGS.

autoboost

An automated step-wise tuning package for gradient boosting.

bictools

bictools - a python package to perform variant detection on proteomic MS data using BICEPS

binding-ddg-predictor

open source repository

bioconda-recipes

Conda recipes for the bioconda channel.

cddd

Implementation of the Paper "Learning Continuous and Data-Driven Molecular Descriptors by Translating Equivalent Chemical Representations" by Robin Winter, Floriane Montanari, Frank Noe and Djork-Arne Clevert.

clqc

Cross-Linking Quality Control package - Quick & easy comparison of crystal structures with CLMS data.

cytana

deepdta

deeplearningtutorial

Deep Learning Tutorial for the Social Bioinformatics Workshop

depart

DePART - Deep Learning for Predicting Anion Exchange Chromatography Retention Times.

evalmoodleexam

Simple script to evaluate Moodle Exams

grimer

immunebuilder

Predict the structure of immune receptor proteins

ismb2019_singlecelltutorial

Tutorials and code for ISMB 2019 short course on Recent Advances in Statistical Methods and Computational Algorithms for Single-Cell Omics Analysis

notebooks-statistics-and-machinelearning

Jupyter Notebooks from the old UnsupervisedLearning.com (RIP) machine learning and statistics blog

pdbx

pdbx is a parser module in python for structures of the protein data bank in the mmcif format

preprocessing

proteinmpnn

Code for the ProteinMPNN paper

python-for-probability-statistics-and-machine-learning

Jupyter Notebooks for Springer book "Python for Probability, Statistics, and Machine Learning"

python-package-template

Personal template for python packages.

pytrapment

pytrapment - making entrapment databases great again!

rawirtfinder

Workflow to find m/z of iRT Peptides for many raw files.

scripts

sgtorch

This is my description.

single-cell-tutorial

Single cell current best practices tutorial case study for the paper:Luecken and Theis, "Current best practices in single-cell RNA-seq analysis: a tutorial"

staged-recipes

A place to submit conda recipes before they become fully fledged conda-forge feedstocks

thinkbayes

Code repository for Think Bayes.