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ncbi-blast-legacy

legacy blast

ncbitaxcollector

A tool for searching NCBI taxonomy information.

nnpack

Acceleration package for neural networks on multi-core CPUs

notebooks

notes

A note-taking system.

nthash

Fast hash function for DNA sequences

nuklear

A single-header ANSI C gui library

odfs

OneDrive Filesystem Driver for Linux

oneliners

Useful bash one-liners for bioinformatics.

openblas

OpenBLAS is an optimized BLAS library based on GotoBLAS2 1.13 BSD version.

pacbam

PaCBAM is a C command line tool for the complete characterization of genomic regions and single nucleotide positions from next-generation sequencing data.

parliament2

Runs a combination of tools to generate structural variant calls on whole-genome sequencing data

passh

𝐬𝐬𝐡𝐩𝐚𝐬𝐬 is 𝒃𝒓𝒐𝒌𝒆𝒏 by design

passwordmanager

PasswordManager is password store tool.

pdqsort

Public Domain QuickSORT implementation in C

peak-classifier

Classify ChIP/ATAC-Seq peaks based on features provided in a GFF

prcx

PRofile Comparer eXtended (PRCx) is a stand-alone program for scoring and aligning profile hidden Markov models (HMMs) of protein families

predictions

primer3

Primer3 is a command line tool to select primers for polymerase chain reaction (PCR).

prospr

ProSPr: Protein Structure Prediction

qiime2

Singularity Recipe for QIIME 2

qsort

Quicksort implemented as a C macro

ratt

Rapid Annotation Transfer Tool

raygui

A simple and easy-to-use immediate-mode-gui library

raylib

A simple and easy-to-use library to enjoy videogames programming

ref-gen

Human reference genome analysis sets

rgaat

Reference based genome assembly and annotation tool for new genome and known genome upgrade

run-one

A BSD-compatible reimplementation of Ubuntu's run-one

samblaster

samblaster: a tool to mark duplicates and extract discordant and split reads from sam files.

sam_realigner

Realigns SAM/BAM/CRAM files to fix pairwise vs multiple alignment issues.