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New MeSH 2022 #-B questions
Most of these are just seeking confirmation that others would also say there is no match, but the first two I do have questions on potential matches:
MH - Bias, Implicit
UI - D000087302
QUESTION: not mapped OR BT: Prejudices (sh85106310)???
MH - Birth Cohort (QUESTION - does this mapping make sense to others?)
UI - D000089822
1:1: Generations (sh85053818)
MH - Access to Healthy Foods (not mapped - no match in LCSH)
UI - D000091483
MH - ADP-Ribosylation Factor 6 (not mapped - no match in LCSH)
UI - D000089982
MH - Ambulatory Care Sensitive Conditions (not mapped - no match in LCSH)
UI - D000090004
MH - AMP-Activated Protein Kinase Kinases (not mapped - no match in LCSH)
UI - D000091162
MH - Anaerobic Ammonia Oxidation (not mapped - no match in LCSH)
UI - D000090642
MH - Andrographis paniculata (not mapped - no match in LCSH)
UI - D000089002
MH - Angiomotins (not mapped - no match in LCSH)
UI - D000091082
MH - Angiopoietin-Like Protein 1 (not mapped - no match in LCSH)
UI - D000091304
MH - Angiopoietin-Like Protein 2 (not mapped - no match in LCSH)
UI - D000091302
MH - Angiopoietin-Like Protein 3 (not mapped - no match in LCSH)
UI - D000091303
MH - Angiopoietin-Like Protein 6 (not mapped - no match in LCSH)
UI - D000091308
MH - Angiopoietin-Like Protein 7 (not mapped - no match in LCSH)
UI - D000091307
MH - Angiopoietin-Like Protein 8 (not mapped - no match in LCSH)
UI - D000091306
MH - Anticoagulant Reversal Agents (not mapped - no match in LCSH)
UI - D000089964
MH - Anticoagulation Reversal (not mapped - no match in LCSH)
UI - D000088542
MH - Antifibrotic Agents (not mapped - no match in LCSH)
UI - D000088962
MH - Antigenic Drift and Shift (not mapped - no match in LCSH)
UI - D000088603
MH - Antiglaucoma Agents (not mapped - no match in LCSH)
UI - D000089502
MH - Antiviral Restriction Factors (not mapped - no match in LCSH)
UI - D000090103
MH - Artificial Virus-Like Particles (not mapped - no match in LCSH)
UI - D000087511
MH - Besnoitia (not mapped - no match in LCSH)
UI - D000089963
MH - Biomolecular Condensates (not mapped - no match in LCSH)
UI - D000091582
MH - Blood Flow Restriction Therapy (not mapped - no match in LCSH)
UI - D000090003
MH - Brain-Gut Axis (not mapped - no match in LCSH)
UI - D000087502
MH - Brucea javanica (not mapped - no match in LCSH)
UI - D000089003
QUESTION: What do we do if a term is deleted in an LCSH or MeSH update?
From Tony: Currently our practice is to delete both the MeSH a d LCSH authority records from the files of mapped headings.
However, NLM usually suggests a different MeSH heading to be used when indexing or cataloging a bibliographic item discussing the concept represented by the deleted heading. In some cases the suggested MeSH heading can still be mapped to an LCSH heading, so we always investigate this possibility.
MeSH 2022 revisions - questions
My questions are mostly of the "this didn't map to LCSH - would someone mind confirming" variety, but there were two other minor issues I wanted to share for feedback. One was "Pimenta", which seemed to already be mapped but I wanted to make sure I wasn't missing something. The other was the Native Hawaiian or Other Pacific Islander term, which had been mapped to Aboriginal Australians. This didn't seem right with the scope, so I adopted the solution described below.
D000075803 (not mapped - no match in LCSH)
MH OLD = Angiopoietin-like 4 Protein []
MH NEW = Angiopoietin-Like Protein 4
D048149 (not mapped - no match in LCSH)
MH OLD = Casein Kinase Iepsilon [P]
MH NEW = Casein Kinase 1 epsilon
D003765 (not mapped - no match in LSCH)
MH OLD = Dental Models [P]
MH NEW = Models, Dental
D000080309 (not mapped - no match in LSCH)
MH OLD = Environmental DNA [P]
MH NEW = DNA, Environmental
D027841 (already mapped - just want to make sure I'm not missing anything?)
MH OLD = Genus Pimenta []
MH NEW = Pimenta
D044468
MH OLD = Oceanic Ancestry Group [P]
MH NEW = Native Hawaiian or Other Pacific Islander
NOTE: I split this into two since previous mapping of Oceanic Ancestry Group was to Aboriginal Australians (and current usage seems to imply that D044468 should map to Americans with Pacific Islander/Hawaiian ancestry)
-MeSH Native Hawaiian or Other Pacific Islander maps to LCSH Narrower Mappings Pacific Islander Americans OR Hawaiians
-MeSH Oceanians maps to LCSH Narrower Mappings Aboriginal Australians OR Pacific Islanders
D017346 (not mapped - no match in LCSH)
MH OLD = Protein-Serine-Threonine Kinases [P]
MH NEW = Protein Serine-Threonine Kinases
D057170 (not mapped - no match in LCSH)
MH OLD = Translational Medical Research [P]
MH NEW = Translational Research, Biomedical
QUESTION: Does it matter that 450s/550s are not up to date in the GitHub mapping files?
This is a great question from Sharon. I have contacted the people in our MeSH mapping Google Group to ask for use cases (ie are people using the whole authority file from GitHub, or are they only taking the mapping fields)? I will report back, but I welcome other input for this question.
New MeSH 2021 S-T questions
Social Cognition (D000083282) --- Link to Social perception (sh 85123982) ? "Social Perception" is a separate MeSh heading higher up the tree
Thrombotic Stroke (D000083244) --- Is a broader mapping to Stroke too broad?
Treatment Switching (D000085582) --- Link to Crossover trials ((DLC)sh 89001948) ? It seems like these are different, but I could definitely be wrong.
Questions from 2021 new MeSH E-F, G-I, J-L (GWN)
Mostly I'm looking to double check some of my decisions, especially when I decided there wasn't a good LSCH match:
- MH - Elevated Plus Maze Test -> NO MATCH
- MH - Embolic Stroke -> NO MATCH
- MH - Exiguobacterium -> NO MATCH (use broader term for LSCH Gram-negative bacteria?)
- MH - Fonsecaea -> NO MATCH
- MH - Food Deserts -> NO MATCH (map to Broader LSCH Food security?) (Note: mapped Food Security -> Food security already)
- MH - Food Insecurity -> NO MATCH (map to Broader LSCH Food security?) (Note: mapped Food Security -> Food security already)
- MH - Functional Status -> NO MATCH (Health status indicators was closest in LCSH, but that is already a 1:1 term in MeSH)
- MH - Fungal Genus Humicola -> NO MATCH
- MH - Gender Role -> Sex role (both of these also mapped to "Gender identity" in both MeSH and LSCH)
- MH - HaCaT Cells -> NO MATCH
- MH - Heart Disease Risk Factors -> Coronary heart disease--Risk factors (Check this one - mapped one MeSH to complex LCSH (but one with its own number) - should this be mapped to both the main term and the subdivision instead?)
- MH - Heteroplasmy -> NO MATCH (would like a second opinion on this)
- MH - Host Adaptation -> NO MATCH (would others do a broader mapping to LCSH Adaptation (Biology)?)
- MH - Hyperferritinemia - NO MATCH
- MH - Hyperthermia -> Would folks map to Fever (which already maps to MeSH Fever)? There doesn't seem to be a non-pathologic hyperthermia term in LCSH.
- MH - Hyperthermic Intraperitoneal Chemotherapy -> unsure - look for a Chemothereapy AND, or NO MATCH? I don't think I can come up with just two LCSH terms
- MH - Identity Recognition -> unsure about this one too. There are already MeSH and LCSH matching terms "Biometric Identification" and LCSH doesn't seem to have a term that gets at the "ability to identify"
- MH - Immune Checkpoint Inhibitors -> NO MATCH
- MH - Immune Checkpoint Proteins -> See above, but also struggling with this one. Immunological Adjuvants (both MeSH and LCSH) doesn't seem to fit. Use that AND Proteins, or NO MATCH?
- MH - Induced Demand -> NO MATCH
- MH - Internet Use -> ??? closest I can get is Internet users, but that doesn't seem equivalent
- MH - Ischemic Stroke -> NO MATCH (though considering Cerebrovascular disease AND Cerebral ischemia?)
- MH - Kimura Disease -> NO MATCH
- MH - Laminopathies -> NO MATCH
- MH - Liberibacter -> NO MATCH
Not tagging anyone as a test to see how notification works.
Questions from 2021 new MeSH M-O (GWN)
Some questions about items that I didn't find exact matches for (and some possible alternatives to no match):
- MH - Mast Cell Stabilizers (D000082142) -> BM Mast cells (or NO MATCH)???
- MH - Mediterranea (D000086222) -> NO MATCH
- MH - Microvascular Density (D000082644) -> NO MATCH
- MH - Mitochondrial Permeability Transition Pore (D000083162) -> NO MATCH
- MH - Models, Biopsychosocial (D000086342)-> NO MATCH??? (this is under MeSH Models, Theoretical, which maps to LCSH Mathematical models, which doesn't seem like an appropriate broader term. Maybe BM LCSH Mental health--Study and teaching?)
- MH - Nasoalveolar Molding (D000084982) -> BM Cleft palate services??? (sh85026928) OR BM Mouth--Abnormalities--Surgery (not an official LC term)???
- MH - Neglecta (D000086242) -> NO MATCH
- MH - Nocardioides (D000083962) -> NO MATCH
- MH - Nocardiopsis (D000086262) -> NO MATCH
- MH - Orientia (D000084162) -> NO MATCH
- MH - Ovarian Torsion (D000082843) -> NO MATCH
New MeSH 2022 E-H questions
MH - Elite Controllers (not mapped - no match in LCSH)
UI - D000088064
MH - Ex utero Intrapartum Treatment Procedures (not mapped - no match in LCSH)
UI - D000088103
MH - Fractional Exhaled Nitric Oxide Testing (not mapped - no match in LCSH)
UI - D000089142
MH - Gaslighting (not mapped - no match in LCSH)
UI - D000090206
MH - Genitourinary Agents (not mapped - no match in LCSH)
UI - D000089162
MH - Germ Cell Ribonucleoprotein Granules (not mapped - no match in LCSH)
UI - D000088262
MH - HCV NS3-4A Protease Inhibitors -> TWO Protease inhibitors (sh85107684) AND Hepatitis C virus (sh94002666) (would like a double check on this on - not totally sure if this works)
UI - D000088802
MH - Health Disparity, Minority and Vulnerable Populations (not mapped - no match in LCSH)
UI - D000091202
MH - Haptic Technology (not mapped - no match in LCSH)
UI - D000089862
MH - Hippo Signaling Pathway (not mapped - no match in LCSH)
UI - D000090683
MH - Home Environment (not mapped - no match in LCSH)
UI - D000091502
MH - Homeobox Protein Nkx-2.2 (not mapped - no match in LCSH)
UI - D000090322
MH - Hospital to Home Transition (not mapped - no match in LCSH)
UI - D000088745
MH - Housing Instability (not mapped - no match in LCSH) (seems like there should be a match?)
UI - D000091003
MH - Housing Quality (not mapped - no match in LCSH) (seems like there should be a match?)
UI - D000091522
New MeSH 2021 P-R questions
See below for my NO MATCH and/or questions about potential mapping for P-R terms:
- Persistent Left Superior Vena Cava (D000083402) -> NO MATCH
- Pestalotiopsis (D000084842) -> NO MATCH
- Phoma (D000084723) -> Phoma? (sh88022084) (unsure - the LCSH points to broader term Sphaeropsidaceae, which isn't mentioned in the MESH records - referring to the same thing? I would lean towards no match, as both of these have different heirarchical relationships within their own vocabularies, but interested in hearing others' thoughts)
- Phomopsis (D000084725) -> Phomopsis? (sh92000224) (same issues as Phoma - see above)
- Photothermal Therapy (D000082703) -> NO MATCH (though possibly BM Fever therapy or Fever therapy + Photochemotherapy, but those combinations don't seem quite right)
- Popliteal Artery Entrapment Syndrome (D000083082) -> NO MATCH (no LSCH for Popliteal Artery)
- Practice Patterns, Pharmacists' (D000086702) -> NO MATCH (or would others BM to Medical care--Utilization review? (https://id.loc.gov/authorities/subjects/sh86004273.html), or use that AND Pharmacists (sh85100592)?)
- Preoperative Exercise (D000082622) -> NO MATCH (doesn't seem to align with either Preoperative education or reoperative care)
- Prolyl Oligopeptidases (D000085822) -> NO MATCH
- Psychosocial Functioning (D000083623) - NO MATCH
- Quick Diagnosis Units (D000084782) -> NO MATCH
- Rappaport (D000086322) -> NO MATCH
- Psychosocial Intervention (D000083626) - NO MATCH? or BT Psychotherapy (sh85108516) (which is the next level up in MeSH tree structure)
- Retinyl Esters (D000084562) -> BM Retenoids (sh85113339) (Question - should I add AND Esters (sh85044949)?)
- Return to School (D000084722) -> NO MATCH
- Rhinorrhea (D000086722) -> NO MATCH (no mapping for next step up "Signs and Symptoms, Respiratory")
- Rhizopus oryzae(D000082763) -> NO MATCH (no mapping for next step up "Rhizopus")
- Routinely Collected Health Data (D000085143) -> NO MATCH (debated about this one - LC Medical records--Data processing is already mapped to MeSH Medical Records Systems, Computerized, which seems to be about the process/systems of collecting data, not the data itself. Open to feedback, though. Also considering BM to Medical records (sh85083010))
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