Comments (1)
@pneerincx yes, it is a bit complicated to make releases due to the strong dependency on HTSlib and BCFtools. I have not decided how to settle that yet. For now you could either use the combination of BCFtools and the latest commit (e.g. 1.10.2-9ecc79a) or you can use the releases from this page.
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Related Issues (20)
- query about calling CNV with multi-samples HOT 1
- Conceptual Confusion about CNV and mCA HOT 2
- check bpm or not HOT 2
- Could not parse gender (0/1/2) in the sample statistics file HOT 2
- Questions about how to filter callset HOT 2
- Written 0 variants for all contigs HOT 1
- GC content in VCF file HOT 2
- The sequence "hs37d5" not found and "No BGZF EOF marker" errors HOT 1
- Any suggestions on filters for downstream analysis? HOT 2
- Imputation Error - terminate called after throwing an instance of std::length_error HOT 1
- no mLOY result but normal mLOX and mCA of male in autosomes HOT 6
- mochatools input format HOT 3
- Unable to infer the A and B alleles while parsing the site... HOT 11
- Incomplete LOH call(s) on Chr12p HOT 10
- genetic map grch38 HOT 1
- Use combined 1kG and HRC as reference panel for imputation HOT 1
- Error [E::bgzf_read_block] Invalid BGZF header at offset 85619 HOT 1
- eLRR: Clarifcation on LRR adjustments HOT 6
- Can I Use CEL Files from Axiom Precision Medicine Research Array (PMRA) Release 3 to Generate CHP Files and Obtain VCF Files Annotated with GC, BAF, and LRR Content? HOT 8
- imp5Converter Output file format is not supported HOT 7
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