This R package includes various data examples for IA-SVA.

To install this package, start R and enter the following commands:

  library(devtools)
  devtools::install_github("dleelab/iasvaExamples")

To load this package, enter the following command to the R console:

  library(iasvaExamples)

Lawlor_Islet_scRNAseq_Read_Counts: Gene-level read counts
Lawlor_Islet_scRNAseq_Annotations: Annotations describing the islet samples and experimental settings

  data("Lawlor_Islet_scRNAseq_Read_Counts")
  data("Lawlor_Islet_scRNAseq_Annotations")

Darmanis_Brain_scRNAseq_Read_Counts: Gene-level read counts
Darmanis_Brain_scRNAseq_Annotations: Annotations describing the brain samples and experimental settings

  data("Darmanis_Brain_scRNAseq_Read_Counts")
  data("Darmanis_Brain_scRNAseq_Annotations")

Xin_Islet_scRNAseq_Read_Counts: Gene-level read counts
Xin_Islet_scRNAseq_Annotations: Annotations describing the islet samples and experimental settings

  data("Xin_Islet_scRNAseq_Read_Counts")
  data("Xin_Islet_scRNAseq_Annotations")