emanuelgoncalves / cancer_proteomics Goto Github PK
View Code? Open in Web Editor NEWCMRI ProCan & Sanger GDSC cancer cell lines SWATH proteomics
License: GNU General Public License v3.0
CMRI ProCan & Sanger GDSC cancer cell lines SWATH proteomics
License: GNU General Public License v3.0
It really was a perfect job, thanks to all the researchers. However, I have some problems now. In the process of learning this literature, I found that many files in the code could not be found. Now I can only find the proteomics data: "procan-depmapsanger_diann_output.tsv" and some data downloaded from Github. However, these file names are different from the data names used in the code "cancer_proteomics/raw_data_processing/3_generate_final_matrices_for_procan-depmapsanger.ipynb". It is difficult to judge their correspondence from their names. Could you please provide some guidance? Thank you very much. Here are a few examples. The first picture is the data I downloaded, and the second picture is some data I couldn't find.
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