elixir-europe / faircookbook-rdmkit Goto Github PK

The page Ireland was created. @elixir-europe/fair-cookbook-editors please check for possible connections with FAIRCookbook recipes.

The page Data security was created. @elixir-europe/fair-cookbook-editors please check for possible connections with FAIRCookbook recipes.

The page Machine learning was created. @elixir-europe/fair-cookbook-editors please check for possible connections with FAIRCookbook recipes.

Currently, fcb_title in a yaml file (example yaml file) is same as page heading for some pages (e.g. plant genomics page) - see screenshot 1.

We briefly discussed, during biohackathon, that fcb_title in yaml file should be same as card title - see screenshot 2.

Screenshot 1

Screenshot 2 (card title is same as page heading)

The recipe with FCB identifier #FCB081 and title 'Creating knowledge graphs from unstructured text' was created.

Currently, issues are automatically generated when a new page or new recipe is created.
The issue, however, does not contain the URL to the new page/recipe.
It would be nicer if the issue already contained the URL so that the editor can simply click on it and go directly to the new item to read and evaluate potential new linking possibilities.
This issue is an outcome of a joint editorial board meeting

The recipe Using OpenRefine and Karma for FAIRification was created. @elixir-europe/rdmkit-editors please check for possible connections with RDMkit pages.

The recipe Publishing plant phenotypic data was created. @elixir-europe/rdmkit-editors please check for possible connections with RDMkit pages.

The page Cyprus was created. @elixir-europe/fair-cookbook-editors please check for possible connections with FAIRCookbook recipes.

The page Health data was created. @elixir-europe/fair-cookbook-editors please check for possible connections with FAIRCookbook recipes.

The page with RDMkit path molgenis_assembly and title 'MOLGENIS' was created.

The page GDPR compliance was created. @elixir-europe/fair-cookbook-editors please check for possible connections with FAIRCookbook recipes.

The recipe Creating a metadata profile for clinical trial protocols was created. @elixir-europe/rdmkit-editors please check for possible connections with RDMkit pages.

The recipe with FCB identifier #FCB074 and title 'Data Protection Impact Assessment and Data Privacy' was created.

A GitHub action should weekly check if content is added on the FAIRCookbook or RDMkit side and open an issue if so

The page Luxembourg was created. @elixir-europe/fair-cookbook-editors please check for possible connections with FAIRCookbook recipes.

The page Ethical aspects was created. @elixir-europe/fair-cookbook-editors please check for possible connections with FAIRCookbook recipes.

The page with RDMkit path ch_resources and title 'Switzerland' was created.

The recipe Registering SwissLipids identifiers in Wikidata was created. @elixir-europe/rdmkit-editors please check for possible connections with RDMkit pages.

The page with RDMkit path ch_resources and title 'Switzerland' was created.

Example:

Suggestion: 1) change link/hyperlink colour to white and, upon hover, link colour changes to dark colour (e.g. dark purple/orange) to make link text more readable or 2) change box colour to white, make link/hyperlink colour to light (but not hard-to-read) and, upon hover, link colour changes to a dark colour.

When new content on RDMkit is added, it is flagged as a new recipe.
This issue is an example: #12
Might be more generally applicable to have the issue titled with:
"New content has been added to" followed by name of the resource (RDMkit or FAIR Cookbook)

This was pointed out by @tabbassidaloii. We are looking for the correct new logo that is not white.

The page Single-cell sequencing was created. @elixir-europe/fair-cookbook-editors please check for possible connections with FAIRCookbook recipes.

The page FAIRtracks was created. @elixir-europe/fair-cookbook-editors please check for possible connections with FAIRCookbook recipes.

The page Policy maker was created. @elixir-europe/fair-cookbook-editors please check for possible connections with FAIRCookbook recipes.

No RDMkit panel is displayed at the end of the "Publishing plant phenotypic data" recipe. (No other panel such as Fairsharing either).
Usually it is displayed after the "What to read next?" section: https://faircookbook.elixir-europe.org/content/recipes/reusability/plant-pheno-data-publication.html#what-to-read-next

The page Trainer was created. @elixir-europe/fair-cookbook-editors please check for possible connections with FAIRCookbook recipes.

It would be nicer if the automatically generated issues would be assigned to the editorial board of the complementary resource.
For example: when an automatically generated issue is triggered by the creation of a new FAIR Cookbook Recipe, the RDMkit editorial board would be assigned on that issue.
This would help triggering actions from the two editorial boards.

This is an outcome of a joint editorial board meeting

This is the issue body

The page Principal Investigator (PI) was created. @elixir-europe/fair-cookbook-editors please check for possible connections with FAIRCookbook recipes.

The page Slovenia was created. @elixir-europe/fair-cookbook-editors please check for possible connections with FAIRCookbook recipes.

The recipe with FCB identifier #FCB082 and title 'Introducing the DATS model' was created.

The page Data sensitivity was created. @elixir-europe/fair-cookbook-editors please check for possible connections with FAIRCookbook recipes.

The page Data Steward was created. @elixir-europe/fair-cookbook-editors please check for possible connections with FAIRCookbook recipes.

The recipe Creating resolvable identifiers was created. @elixir-europe/rdmkit-editors please check for possible connections with RDMkit pages.

The page Human pathogen genomics was created. @elixir-europe/fair-cookbook-editors please check for possible connections with FAIRCookbook recipes.

The recipe with FCB identifier #FCB083 and title 'Registering SwissLipids identifiers in Wikidata' was created.

The recipe Mapping IMI APPROACH datasets to CDISC-SDTM standard was created. @elixir-europe/rdmkit-editors please check for possible connections with RDMkit pages.

The page Research Software Engineer was created. @elixir-europe/fair-cookbook-editors please check for possible connections with FAIRCookbook recipes.

The page Costs of data management was created. @elixir-europe/fair-cookbook-editors please check for possible connections with FAIRCookbook recipes.

If we keep track of the titles in the mapping file, it is an extra thing that needs to be updated, since it is bound to change through time. My proposal is to take it out and to read out the titles from the repositories. It is possible we will need to generate a file specifically for this purpose (knowing the title based on the identifier)