ejseqera Goto Github PK
Name: Esha Joshi
Type: User
Company: Seqera Labs
Bio: Bioinformatics Engineer @ Seqera Labs
Twitter: _EshaJoshi
Location: Toronto
Name: Esha Joshi
Type: User
Company: Seqera Labs
Bio: Bioinformatics Engineer @ Seqera Labs
Twitter: _EshaJoshi
Location: Toronto
Amplicon sequencing analysis workflow using DADA2 and QIIME2
Source code for the Seqera documentation portal.
Pipeline to fetch metadata and raw FastQ files from public and private databases
Classic hello world script in Nextflow language
Pipeline to aggregate pertinent metrics across pipeline runs on the Seqera Platform (beta)
A nextflow pipeline to perform state-of-the-art genome-wide association studies.
Minimal, reproducible examples for testing of NF and/or Tower bugs
Protein 3D structure prediction pipeline
RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
A proof of concept of RNAseq pipeline
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
Set of scripts to interact with Seqera Platform
Infrastructure as code implementation of the seqeralabs/showcase Workspace in Tower Cloud
Test data to be used for automated testing with the nf-core pipelines
Nextflow training material
POC for automating Tower setup and pipeline launching through the CLI with GCP as a use-case
Python implementation for automated pipeline launching through Tower CLI
Run e2e tw-pywrap implementation via CI
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.