ejpsoil / soildata-assimilation-guidance Goto Github PK
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License: Creative Commons Attribution 4.0 International
Document link:
https://github.com/ejpsoil/soildata-assimilation-guidance/blob/main/docs/tools/rml.md
Please reassign if someone else can contribute.
$ docker ps
CONTAINER ID IMAGE COMMAND CREATED STATUS PORTS NAMES
$ docker compose up
[+] Running 1/0
⠿ Container virtuoso-sandbox-virtuoso-1 Created 0.0s
Attaching to virtuoso-sandbox-skosmos-1, virtuoso-sandbox-virtuoso-1
virtuoso-sandbox-virtuoso-1 | Starting the Virtuoso Server
virtuoso-sandbox-virtuoso-1 |
virtuoso-sandbox-virtuoso-1 | Fri Jan 20 2023
virtuoso-sandbox-virtuoso-1 | 09:03:40 { Loading plugin 1: Type `plain', file `geos' in `../hosting'
virtuoso-sandbox-virtuoso-1 | 09:03:40 plain version 1.2.3234 from OpenLink Software
virtuoso-sandbox-virtuoso-1 | 09:03:40 GEOS plugin based on Geometry Engine Open Source library from Open Source Geospatial Foundation
virtuoso-sandbox-virtuoso-1 | 09:03:40 SUCCESS plugin 1: loaded from ../hosting/geos.so }
virtuoso-sandbox-virtuoso-1 | 09:03:40 { Loading plugin 2: Type `plain', file `proj4' in `../hosting'
virtuoso-sandbox-virtuoso-1 | 09:03:40 plain version 1.1.3234 from OpenLink Software
virtuoso-sandbox-virtuoso-1 | 09:03:40 Cartographic Projections support based on Frank Warmerdam's proj4 library
virtuoso-sandbox-virtuoso-1 | 09:03:40 SUCCESS plugin 2: loaded from ../hosting/proj4.so }
virtuoso-sandbox-virtuoso-1 | 09:03:40 { Loading plugin 3: Type `plain', file `shapefileio' in `../hosting'
virtuoso-sandbox-virtuoso-1 | 09:03:40 ShapefileIO version 0.1virt71 from OpenLink Software
virtuoso-sandbox-virtuoso-1 | 09:03:40 Shapefile support based on Frank Warmerdam's Shapelib
virtuoso-sandbox-virtuoso-1 | 09:03:40 SUCCESS plugin 3: loaded from ../hosting/shapefileio.so }
virtuoso-sandbox-virtuoso-1 | 09:03:40 OpenLink Virtuoso Universal Server
Error response from daemon: driver failed programming external connectivity on endpoint virtuoso-sandbox-skosmos-1 (495c15de94d6eb0a37cf2f6ee6cd46cf1c4c310402d085041ced7cf19f2cd7ff): Error starting userland proxy: listen tcp4 0.0.0.0:80: bind: address already in use
$ docker ps
CONTAINER ID IMAGE COMMAND CREATED STATUS PORTS NAMES
29a611fc7c0f openlink/virtuoso-opensource-7:latest "/virtuoso-entrypoin…" 4 minutes ago Up 10 seconds 1111/tcp, 0.0.0.0:8890->8890/tcp, :::8890->8890/tcp virtuoso-sandbox-virtuoso-1
To complete once pull request #1 is merged.
There currently two meta-data documents in the root:
data-organisation.md
metadata.md
It is probably best to merge them into a single document named Metadata. The term "data organisation" is uncanny and ambiguous.
Document link:
https://github.com/ejpsoil/soildata-assimilation-guidance/blob/main/docs/uri.md
Please reassign if someone else can contribute.
only the first day recordings are now available, can you add the others that are ok to share?
Document link:
https://github.com/ejpsoil/soildata-assimilation-guidance/blob/main/docs/tools/tarql.md
Please reassign if someone else can contribute.
How they compare to vocabs/ontologies
add a video from first course
At ISRIC we've noticed an increased use of markdown oriented workflows, each using dedicated technology. We felt the need to align in technology. That's why we've migrated this repository from MKdocs to Quarto.
'Alternatively, MDME is an online visual editor for mcf files' can you load the yaml file quoted above in this editor easily? If so, can you elaborate/explain on this?
On https://ejpsoil.github.io/soildata-assimilation-guidance/cookbook/pygeometa.html
https://github.com/INSPIRE-MIF/gp-geopackage-encodings describes on approach of providing a geopackage as encoding for a INSPIRE datamodel.
This approach would fit many of our partners, but we need to provide some guidance on how to do it and which datamodel to use
I added this placeholder for that content
https://ejpsoil.github.io/soildata-assimilation-guidance/tools/glosis-db/
One of the tools developed is a template which describes the alternative encoding
, the template is here. Most substantial is the option to provide a mapping from the alternative encoding to the uml and vice versa.
Probably needs further discussion (include thorsten)
2 options here:
Currently https://ejpsoil.github.io/soildata-assimilation-guidance/tools/virtuoso/ introduces the virtuoso and skosmos software the recipe still needs to be extended on how to load a ttl on virtuosos and link it to skosmos (readers are invited to load a sample ttl into virtuoso (or create one with skos play)
The extending codelist recipe would provide more details on how the ttl is structured, not sure if skos play provides enough capabilities to indicate the hierarchy of codelists required for codelist extension
Page https://ejpsoil.github.io/soildata-assimilation-guidance/tools/virtuoso/ should be completed to contain a section on how to load data into virtuoso, we could use the glosis codelists, or some other sample
suggestion is to add a sparql example to the dcat article, the sparql query would extract any datasets that match a certain keyword
i want to try to extract some rdf from data.isric.org, to be loaded on the local virtuoso instance
https://data.isric.org/geonetwork/srv/eng/rdf.metadata.get?uuid=a6320590-0899-4b60-bf4d-f80282bbb72c
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