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Name: Erik Clarke
Type: User
Bio: Data scientist with an interest in developing free/open-source tools for scientific research.
Location: San Diego, CA
Name: Erik Clarke
Type: User
Bio: Data scientist with an interest in developing free/open-source tools for scientific research.
Location: San Diego, CA
Conda package for AMOS
Python utility for converting between config files and argument parsers
A shitty little quiz program to help you memorize the abbreviations and polarity/charge of the amino acids.
Official git repository for Biopython (converted from CVS)
blog
Consensus taxonomy assignment for short reads (great for fungi)
Scripts for CLARK to facilitate deployment
Introduction to using conda
Erik's Config Files
a signal-level demultiplexer for Oxford Nanopore reads
general utilities for manipulating sequences and fasta files - high performance kmer counting
Identify DNA barcodes in high-throughput sequencing data files
the usual, just some dotfiles
Conda recipe for DSK 1.6906
A reimplementation of DSK (Rizk et al. 2013) in Rust
Config files for my GitHub profile.
random R functions
Qualitative color palette toolkit for R
Useful theme(s) for ggplot2
Speedy FASTA/FASTQ library and toolkit
🐈🐈🐈🐈: tools for working with categorical variables (factors)
Simple, quick FASTQ to FASTA converter
Scans a directory of (optionally paired) FASTQ files for the prevalence of particular targets
Column scatter / beeswarm-style plots in ggplot2
An implementation of the Grammar of Graphics in R
A hands on forking, cloning, pulling, pushing, merging tutorial.
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.