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Neo4j Guides for Project Rephetio Predictions

This repository creates HTML guides which can be played in the Neo4j Browser. Each guide details a prediction of whether a compound will treat a disease. The guides are based on Hetionet v1.0 and are hosted at https://neo4j.het.io. For more details on our public Neo4j instance, see this discussion

Files

neo4j-guides contains a program to convert asciidoc guides to HTML guides.

template-full.txt and template-mini.txt are templates for creating asciidoc guides, which are designed to be formatted using Python's string formatting. template-full.txt is for compound–disease pairs without any metapaths that provide support. template-full.txt is for compound–disease pairs with supportive metapaths and hence supportive paths.

The HTML guides are exported to guides, which is ignored due to the large number of files. The compressed version of this directory is available in guides.tar.bz2.

License

All original work in this repository is released as CC0 1.0.

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