Name: Dennis Schmitz
Type: User
Company: Center for Infectious Disease Control
Bio: Bioinformatician at the Dutch National Institute for Public Health and the Environment (RIVM) and Erasmus Medical Center (EMC) | Data Carpentries Instructor
Location: Netherlands
Blog: https://www.rivm.nl/en/international
Dennis Schmitz's Projects
RIVM Bioinformatics Workshop: Genomics Data Wrangling. September 2018.
Website for KNVM-DMT DC Genomics workshop
A tool for drawing ANI clustermap between all-vs-all microbial genomes using fastANI & seaborn
Accessible Metagenomics/viromics for public health and clinical domains. Focuses on automation, accessibility and a clear audit trail.
Metagenomics/viromics pipeline that focuses on automation, user-friendliness and a clear audit trail. Jovian aims to empower classical biologists and wet-lab personnel to do metagenomics/viromics analyses themselves, without bioinformatics expertise.
Jovian repo for demo with Binder
A passthrough repo to use prebuilt Docker container on MyBinder to show Jovian demo