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celldb-pd

A module for analyzing data in celldb using pandas

celldb-projection-pca

Projects cohorts in celldb to a new feature set in PCA space

celldb-web

A web component for accessing data from celldb

cgp-dashboard-service

A web API for powering the dcc-dashboard

cgp-dss-data-loader

Simple data loader for CGP HCA Data Store

cgtd

Decentralized distributed database of genomic and clinical data.

char-rnn

Multi-layer Recurrent Neural Networks (LSTM, GRU, RNN) for character-level language models in Torch

char-rnn-tensorflow

Multi-layer Recurrent Neural Networks (LSTM, RNN) for character-level language models in Python using Tensorflow

chiron

A basecaller for Oxford Nanopore Technologies' sequencers

clinvar

This repo provides tools to convert ClinVar data into a tab-delimited flat file, and also provides that resulting tab-delimited flat file.

compliance

A compliance test suite for the APIs defined in the schemas repository.

concierge

consonance

Core consonance utilities for scheduling, reporting on, and provisioning VMs for workflows

container-demos

ipfs container demos

coop

General resources for the cooperative with links to other projects

d3sparql

JavaScript library for executing SPARQL query and transforming resulted JSON for visualization in D3.js

data-bundle-examples

A repository housing metadata and data files (or links to data files) that are being prepared as sample data bundles for various uses.

data-object-examples

Example Data Object metadata

data-object-service-schemas

A repository for the schemas used for the data object service.

data-object-tables

data-platforms

Components of the Commons Alliance

datacommons

dataguids.org

Dataguids.org website

datlas

A spatial visualization system

dcc-spinnaker

The server web service and UI for interacting with the Spinnaker validation system.

dcp-cli

HCA Data Coordination Platform Command Line Interface

dcp-client

Client to the gen3 dcp platform in Python

dcp-demo

Jupyter notebook for GTEx and TOPMed projects at Data Commons Pilot (DCP) project

democratic-modernity

django-rdf-io

Simple RDF serialiser/deserialiser to support synching a django model with an external triple-store