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dakota-palmer's Projects

deeplabcut icon deeplabcut

Markerless pose estimation of user-defined features with deep learning for all animals, including humans

fp-analysis icon fp-analysis

DP's MATLAB, Python, & R code workflow for fiber photometry analysis (Palmer et al 2023 paper)

fpa icon fpa

Fiber photometry analysis

guppy icon guppy

Guided Photometry Analysis in Python, a free and open-source FP analysis tool.

medpc2excel icon medpc2excel

medpc2excel is a Python package for convert single or multiple medpc data file into Excels.

medpc_preprocessing icon medpc_preprocessing

A collection of python scripts for vizualizing, cleaning, and organizing raw data files from Med Associates (MED-PC)

opto-analysis-matlab icon opto-analysis-matlab

Optogenetics analysis pipeline developed from Christelle Cayton's code for Jocelyn Richard’s Lab at the University of Minnesota. Used for analyses including those reported in Palmer et al., 2023.

pmat icon pmat

Fiber Photometry Modular Analysis Tool Suite

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