The .tpl file Katch.tpl can be compiled by ADMB by the command: admb Katch.tpl.
Navigate to ./src Code to run the BSAI Arrowtooth flounder assessment model can be run as follows: ./Katch -ind atf_bsai.dat
Code to run the GOA Arrowtooth flounder assessment model can be run as follows: ./Katch -ind atf_goa.dat
Code to run the BSAI Kamchatka flounder model can be run as follows: ./Katch -ind kam.dat
Output is called Katch.rep (regardless of the input .dat file). Read in the read-rep.R file and then use the Katch_plotting.R file to make plots.