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rgeoda's Introduction

rgeoda

rgeoda is a R package for spatial data analysis based on libgeoda and GeoDa.

version 0.0.4

  • pca
  • mds (multi dimensional scaling)
  • multivariate local geary
  • multivariate local join count
  • quantile LISA
  • Add False Discovery Rate (FDR) in local spatial autocorrelation
  • NaturalBreaks
  • QuantileBreaks
  • Hinge15Breaks
  • Hinge30Breaks
  • PercentileBreaks
  • StddevBreaks

version 0.0.3

This version provides following features:

  • Spatial Weights
    • Queen
    • Rook
    • Distance based
    • K-Nearest Neighbor
    • Kernel
  • Spatial Autocorrelation
    • Local Moran
    • Local Geary
    • Local Getis-Ord
    • Local Join Count
  • Spatial Clustering
    • SKATER
    • REDCAP
    • Max-p

Installation

NOTE: we are working to make rgeoda avaiable in CRAN, so that it could be installed easily (target in 0.1.0 version).

rgeoda depends on wkb package. Sometimes, the “dependencies=TRUE” argument of install.package() doesn’t guarantee the installation ow wkb automatically. To avoid any potential issues of installation, you can install it first before rgeoda installation:

install.packages('wkb')

Mac

For Mac users, the “Xcode Command Line Tools” needs to be installed for installing rgeoda. It is a free software provided by Apple, which can be installed by using the following command in a terminal:

xcode-select --install 

In R console, use install.packages() function to install rgeoda from its source pacakge:

install.packages("https://github.com/lixun910/rgeoda/releases/download/0.0.3/rgeoda_0.0.3.tar.gz")
# or the development version
# devtools::install_github("lixun910/rgeoda")

Windows

In R console, use install.packages() function to install rgeoda from its binary pacakge:

install.packages("https://github.com/lixun910/rgeoda/releases/download/0.0.3/rgeoda_0.0.3.zip")

Linux

For Linux users, the “Build Essential Tools” needs to be installed first:

sudo apt-get update
sudo apt-get install build-essential

In R console, use install.packages() function to install rgeoda from its source pacakge:

install.packages("https://github.com/lixun910/rgeoda/releases/download/0.0.3/rgeoda_0.0.3.tar.gz")

Tutorials

Jupyter Notebooks: https://github.com/lixun910/rgeoda_tutorial/tree/v0.0.3

Note: the second notebook (esda) depends on sp, and the third notebook depends on sf package.

You can try these R jupyter notebooks in your browser via MyBinder (no installation required): badge https://mybinder.org/v2/gh/lixun910/rgeoda_tutorial/v0.0.3

Previous versions:

version 0.0.1

NOTE: This version is still under development, with many changes that might cause issues and errors.

This version is a prototype of rgeoda aims to build up the framework that allows rgeoda to be easily installed in R on different platforms (Windows, Mac OSX, and Linux).

Installation

Windows

In R console, use install.packages() function to install rgeoda from its source pacakge at: https://github.com/lixun910/rgeoda/releases/download/0.0.1/rgeoda_0.0.1.zip

install.packages("https://github.com/lixun910/rgeoda/releases/download/0.0.1/rgeoda_0.0.1.zip", dependencies=c('wkb'))

Mac OSX and Linux

In R console, use install.packages() function to install rgeoda from its source pacakge at: https://github.com/lixun910/rgeoda/archive/0.0.1.tar.gz

install.packages("https://github.com/lixun910/rgeoda/archive/0.0.1.tar.gz", dependencies=c('wkb'))

Tutorials

Limited features of spatial data analysis are provided for now. Please see the following jupyter notebooks

Notebooks: https://github.com/lixun910/rgeoda_tutorial

Webpages:

Note: the second notebook (esda) depends on sp, and the third notebook depends on sf package.

You can try thoese R jupyter notebooks in your browser (no installation required): badge https://mybinder.org/v2/gh/lixun910/rgeoda_tutorial/v0.0.1

rgeoda's People

Contributors

lixun910 avatar giserdaishaoqing avatar

Watchers

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