cedergrouphub / synthesis-action-retriever Goto Github PK
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Annotated dataset and scripts for automatic retrieval of materials synthesis actions.
when I test the synthesis-action-retriever, i got the error like this:
(fsl) D:\LFSS\synthesis-action-retriever>python
Python 3.8.16 | packaged by conda-forge | (default, Feb 1 2023, 15:53:35) [MSC v.1929 64 bit (AMD64)] on win32
Type "help", "copyright", "credits" or "license" for more information.
from synthesis_action_retriever.synthesis_action_retriever import SynthActionRetriever
Traceback (most recent call last):
File "", line 1, in
File "D:\LFSS\synthesis-action-retriever\synthesis_action_retriever\synthesis_action_retriever.py", line 5, in
from gensim.models import Word2Vec
File "D:\aconcon\envs\fsl\lib\site-packages\gensim-3.8.0-py3.8-win-amd64.egg\gensim_init_.py", line 5, in
from gensim import parsing, corpora, matutils, interfaces, models, similarities, summarization, utils # noqa:F401
File "D:\aconcon\envs\fsl\lib\site-packages\gensim-3.8.0-py3.8-win-amd64.egg\gensim\corpora_init_.py", line 6, in
from .indexedcorpus import IndexedCorpus # noqa:F401 must appear before the other classes
File "D:\aconcon\envs\fsl\lib\site-packages\gensim-3.8.0-py3.8-win-amd64.egg\gensim\corpora\indexedcorpus.py", line 15, in
from gensim import interfaces, utils
File "D:\aconcon\envs\fsl\lib\site-packages\gensim-3.8.0-py3.8-win-amd64.egg\gensim\interfaces.py", line 21, in
from gensim import utils, matutils
File "D:\aconcon\envs\fsl\lib\site-packages\gensim-3.8.0-py3.8-win-amd64.egg\gensim\matutils.py", line 1104, in
from gensim._matutils import logsumexp, mean_absolute_difference, dirichlet_expectation
File "init.pxd", line 242, in init gensim._matutils
ValueError: numpy.ndarray size changed, may indicate binary incompatibility. Expected 96 from C header, got 80 from PyObject
i think it might be the problem about the numpy, here is my list:
Package Version
absl-py 1.4.0
astunparse 1.6.3
blis 0.7.9
cachetools 5.3.0
catalogue 2.0.8
certifi 2022.12.7
charset-normalizer 3.1.0
click 8.1.3
colorama 0.4.6
confection 0.0.4
cymem 2.0.7
gast 0.3.3
gensim 3.8.0
google-auth 2.17.2
google-auth-oauthlib 1.0.0
google-pasta 0.2.0
grpcio 1.54.0rc1
h5py 2.10.0
idna 3.4
importlib-metadata 6.1.0
Jinja2 3.1.2
Keras-Preprocessing 1.1.2
langcodes 3.3.0
Markdown 3.4.3
MarkupSafe 2.1.2
murmurhash 1.0.9
numpy 1.16.0
oauthlib 3.2.2
operations-extractor 4.0.0
opt-einsum 3.3.0
packaging 23.0
pathy 0.10.1
pip 23.0.1
preshed 3.0.8
protobuf 4.22.1
pyasn1 0.5.0rc2
pyasn1-modules 0.3.0rc1
pydantic 1.10.7
regex 2023.3.23
requests 2.28.2
requests-oauthlib 1.3.1
rsa 4.9
scipy 1.4.1
setuptools 67.6.1
six 1.16.0
smart-open 6.3.0
spacy 4.0.0.dev0
spacy-legacy 3.0.12
spacy-loggers 1.0.4
srsly 2.4.6
tensorboard 2.12.1
tensorboard-data-server 0.7.0
tensorboard-plugin-wit 1.8.1
tensorflow 2.3.0
tensorflow-estimator 2.3.0
termcolor 2.2.0
thinc 9.0.0.dev3
tqdm 4.65.0
typer 0.7.0
typing_extensions 4.5.0
urllib3 1.26.15
wasabi 1.1.1
Werkzeug 2.2.3
wheel 0.40.0
wrapt 1.15.0
zipp 3.15.0
I am wondering what version is correct for the installation. Thank you so much.
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