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graphfusion's Introduction

GraphFusion

An Intuitive Graph Analytics, Data Fusion, and Visualization Tool

Pull/Update the docker image

docker pull carlosjesusgh/graphfusion:latest

Run the application in a docker container (no development)

docker run -it --rm -p 8000:8000 --name gf_container carlosjesusgh/graphfusion:latest
graphfusion_installation.mp4

Run the application in a docker container for development

docker run -it -p 8000:8000 -v /repos/GraphFusion:/home/GraphFusion_host --entrypoint "/home/init_script_dev.sh" --name gf_container carlosjesusgh/graphfusion:latest

Note: The volume is mounted to the host folder /repos/GraphFusion. Please change it to the host folder where you cloned the repository.

To run bash in the running container:

docker exec -it gf_container bash

Some examples of how to use the app

Network visualization

GraphFusion.example.-.Vis.webm

Clustering, enrichment, and Drugstone

GraphFusion.example.-.Clust.and.Enrich.and.Drugstone.webm

Data fusion with an iCell setup

GraphFusion.example.-.iCell.webm

Data fusion with a Matrix Completion setup

GraphFusion.example.-.PSB.webm

graphfusion's People

Contributors

carlosjesusgh avatar

Watchers

James Cloos avatar avatar

graphfusion's Issues

Old version of ubuntu

Hi Carlos,

I notice you use a very old version of ubuntu, which is end of life in May. Should't you use something more recent?

Sam

old version python3

Hi Carlos,

python 3.7 is considered end of life june 2023.

Shouldn't we use a more recent python version?

Sam

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