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decimer-image_transformer

DECIMER 1.0: Deep Learning for Chemical Image Recognition using Transformers

deepcoy

deepdock

An experimental package for deep learning for molecular docking

deepfacelab

DeepFaceLab is the leading software for creating deepfakes.

deepfacelive

Real-time face swap for PC streaming or video calls

deepfmpov3d

Implementation of Shape and Electrostatic similarity metric in deepFMPO.

deeppocket

Ligand Binding Site detection using Deep Learning

deeppurpose

A Deep Learning Toolkit for DTI, Drug Property, PPI, DDI, Protein Function Prediction (Bioinformatics)

deeprank

Deep learning framework for data mining protein-protein interactions using CNN

deepsmiles

DeepSMILES - A variant of SMILES for use in machine-learning

deepsocial

Social Distancing Monitoring and Infection Risk Assessment in COVID-19 Pandemic and Beyond

delinker

develop-zyh

DEVELOP - Deep Generative Design with 3D Pharmacophoric Constraints

dgl

Python package built to ease deep learning on graph, on top of existing DL frameworks.

dgl-lifesci

Python package for graph neural networks in chemistry and biology

dialogueextractor

A tool that extracts video clips using subtitles

diffdock

Implementation of DiffDock: Diffusion Steps, Twists, and Turns for Molecular Docking

diffdock-pp

Implementation of DiffDock-PP: Rigid Protein-Protein Docking with Diffusion Models in PyTorch (ICLR 2023 - MLDD Workshop)

difflinker

DiffLinker: Equivariant 3D-Conditional Diffusion Model for Molecular Linker Design

diffsbdd

A Euclidean diffusion model for structure-based drug design.

dig

A library for graph deep learning research

dockey

an integrated tool for molecular docking and virtual screening

dockstream

DockStream: A Docking Wrapper to Enhance De Novo Molecular Design

dp5

Python workflow for DP5 and DP4 analysis of organic molecules

dssp

Application to assign secondary structure to proteins

dust3d

:dromedary_camel: Dust3D is a cross-platform open-source 3D modeling software. Auto UV unwrapping, auto rigging with PBR Material support, pose and motion authoring all in one.

easyocr

Ready-to-use OCR with 80+ supported languages and all popular writing scripts including Latin, Chinese, Arabic, Devanagari, Cyrillic and etc.

encom

Elastic Network Contact Model (coarse-grained Normal Mode Analysis software)

equibind

EquiBind: geometric deep learning for fast predictions of the 3D structure in which a small molecule binds to a protein

espsim

Scoring of shape and ESP similarity with RDKit