This is based on the thesis template here. To run this you need Python 2.7 with PythonTex, PDFLaTeX and BibTeX. These dependancies are needed:

• matplotlib
• texfigure

You can build the thesis from inside a conda environment as long as you have TexLive and pythontex installed in your system path. You can create a conda environment with the following command:

conda create -n thesis python=2 matplotlib

activate the new environment with:

source activate thesis

then

pip install texfigure

Currently this is not accessible without my ssh key. This will be fixed as soon as I can work out a techincal way of doing it, and I have had a break.

Once the data has been obtained and the environment built, you can build the pdf with the following command:

python run.py thesis

This will produce a file: thesis/thesis.pdf.

The LaTeX here I used is copyright Krishna Kumar and licensed under the terms of the MIT licence. All LaTeX code (not embedded Python) is licenced under the MIT license. All Python code contained in this repository is copyright Stuart Mumford and is made availble under the MIT or 2-clause BSD license.