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GPUGA

Graphics Processing Units Genetic Algorithm

What is GPUGA?

  • GPUGA stands for Graphics Processing Units Genetic Algorithm. It is a code for empirical potential fitting using the genetic algorithm (GA).
  • Using my laptop with a GeForce RTX 2070 GPU card, fitting an empirical potential using GPUGA only takes about one minute!

Prerequisites

  • You need to have a GPU card with compute capability no less than 3.5 and a CUDA toolkit which supports your GPU card installed.
  • Works in both Windows and Linux.

Compile GPUGA

  • Go to the src directory and type make. When the compilation finishes, an executable named gpuga will be generated in the src directory.

Run GPUGA

  • To run the provided example, go to the directory where you can see src and type src/gpuga < examples/input.txt
  • The example corresponds to the case study for diamond silicon in the paper below.

Citation

If you use GPUGA in your published work, we kindly ask you to cite the following paper which describes the central algorithms used in GPUGA:

Author:

  • Zheyong Fan (Bohai University and Aalto University)
    • brucenju(at)gmail.com

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gpuga's Issues

box input not consistent with manual

The manual said that the box for a configuration in train.in should be in this order:
a_x a_y a_z b_x b_y b_z c_x c_y c_z
However, the code requires the following order:
a_x b_x c_x a_y b_y c_y a_z b_z c_z
So either the code or the manual should be changed.

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