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cromwell-monitor-deprecated

Generate stats for Cromwell task calls including resource utilization & estimated costs

cromwell-task-monitor-bq

Scalable reporting of Cromwell task call resource monitoring data to BigQuery

cromwell-tools

A collection of Python clients and accessory scripts for interacting with the Cromwell

cromwhelm

Tentative first steps into the world of helm charts

crowd-jaas

JAAS LoginModule for Crowd

ctat-pvacseq

ctat-virusintegrationfinder

ctc_firehose

Directions and upload scripts for connecting LIMS to Firehose (CTC QC and analysis)

cumulonimbus

Various code for analysis workflows

cwl-proto

Reading and writing Common Workflow Language to Protocol Buffers. I.e. CWL <-> Protobuf

cxowrapper

Wrapper for Python's cx_Oracle database API that returns results in a slightly more sane format.

cytominer_scripts

Scripts for processing morphological profiling data using cytominer

dagster-utils

Utilities and reusable patterns for using Dagster for Broad pipeline orchestration

damage

Code related to comment on "DNA damage is a pervasive cause of sequencing errors, directly confounding variant identification.", Science 355, 752–756 (2017)

data-provider-service

Data Repo Entity Provider

datacentred-ldap

OpenLDAP module for Puppet

datarepo-actions

datarepo-helm

A helm repo for Broad Data Science Platforms helm charts

datarepo-helm-definitions

Helm deployment specific values and definitions for Dev, Integration and Prod

datarepo-umbrella-release-action

dcp-community

HCA Data Coordination Platform community content

ddp-android-sdk

ddp-angular

Angular code for participant-facing pepper studies

ddp-study-manager

Pepper Study Manager

ddp-study-manager-ui

Pepper Study Manager UI

ddp-study-server

Pepper Study Server

ddp_monster_ingest

decisionanalysis

deepometry

Image classification for imaging flow cytometry.

deepprofilerexperiments