bioperl / bio-microarray Goto Github PK
View Code? Open in Web Editor NEWInitial repository for microarray-based tools (may be renamed)
Home Page: http://bioperl.org
License: Other
Initial repository for microarray-based tools (may be renamed)
Home Page: http://bioperl.org
License: Other
[root@reslnrefo01 Bio-Microarray]# ./Build install --verbose=1
Building Bio-Microarray-Tools
Skipping /usr/local/share/perl5/Bio/Tools/MitoChipV2Parser.pm (unchanged)
Skipping /usr/local/share/perl5/Bio/Tools/ReseqChip.pm (unchanged)
Skipping /usr/local/share/man/man3/Bio::Tools::ReseqChip.3pm (unchanged)
Skipping /usr/local/share/man/man3/Bio::Tools::MitoChipV2Parser.3pm (unchanged)
Writing /usr/local/lib64/perl5/auto/Bio/Microarray/Tools/.packlist
[root@reslnrefo01 Bio-Microarray]# ./Build test
t/ReseqChip.t .. 1/10
# Failed test 'use Bio::Microarray::Tools::ReseqChip;'
# at t/ReseqChip.t line 13.
# Tried to use 'Bio::Microarray::Tools::ReseqChip'.
# Error: Can't locate Bio/Microarray/Tools/ReseqChip.pm in @INC (@INC contains: . /mnt/isilon/cbmi/variome/leipzig/aplenc/mito/Bio-Microarray/blib/lib /mnt/isilon/cbmi/variome/leipzig/aplenc/mito/Bio-Microarray/blib/arch /usr/local/lib64/perl5 /usr/local/share/perl5 /usr/lib64/perl5/vendor_perl /usr/share/perl5/vendor_perl /usr/lib64/perl5 /usr/share/perl5) at t/ReseqChip.t line 13.
uhhh, ok let's try where I think it went
perl -e 'use Bio::Tools::ReseqChip'
Can't locate Bio/Microarray/Tools/MitoChipV2Parser.pm in @INC (@INC contains: /usr/local/lib64/perl5 /usr/local/share/perl5 /usr/lib64/perl5/vendor_perl /usr/share/perl5/vendor_perl /usr/lib64/perl5 /usr/share/perl5 .) at /usr/local/share/perl5/Bio/Tools/ReseqChip.pm line 162.
BEGIN failed--compilation aborted at /usr/local/share/perl5/Bio/Tools/ReseqChip.pm line 162.
d'oh!
Bio::Microarray
. Not sure if there is a great source of documentation for this namespace.
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