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rargelaguet avatar rargelaguet commented on September 15, 2024

I think the problem is that the MOFA python package is not properly installed. Can you open your python interpreter and check if you can import the mofa package?
If this works, can you restart R and try to load the package (from R) via reticulate (https://rstudio.github.io/reticulate/)?

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ashishjain1988 avatar ashishjain1988 commented on September 15, 2024

I am able to import the "mofa" package both from the python interpreter and from R.

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rargelaguet avatar rargelaguet commented on September 15, 2024

Then I see no reason why it should not work.. Do other packages like numpy/scipy work from R reticulate? Can you perhaps try with Python 3?

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ashishjain1988 avatar ashishjain1988 commented on September 15, 2024

It's working on the UNIX system (RHEL) with python 2.7.5 and R 3.5. Earlier, I installed it on my MacBook having macOS Sierra. Is this package platform dependent? Have you guys tested it on Mac?
And thank you for your help and quick replies!!

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rargelaguet avatar rargelaguet commented on September 15, 2024

We tested it on the three common platforms and works fine. As long as the connection between R and python via reticulate is working, MOFA should run. I noticed that under some conditions one needs to restart R after installing the mofa python package. Let me know how it goes

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ashishjain1988 avatar ashishjain1988 commented on September 15, 2024

I updated the OS and its working now. Thanks for all the help!!

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