Name: Ricard Argelaguet
Type: User
Company: Altos Labs (https://altoslabs.com/)
Bio: Computational biologist at Altos Labs studying multi-omics at single-cell resolution. Previously Babraham Institute, EMBL-EBI and Cambridge Uni.
Twitter: RArgelaguet
Location: Cambridge, UK
Blog: https://rargelaguet.github.io/
Ricard Argelaguet's Projects
Dnmt3a, Dnmt3b, Dnmt1 KO scRNA-seq mouse early organogenesis
10x_gastrulation_TetChimera
Anàlisi de dades sobre l'autoconsum energètic a Catalunya
DUX4_ hESCs_multiome
COOL-seq Guo2017
MOFA training resources
Code to reproduce the analysis of "Decoding gene regulation in the mouse embryo using single-cell multi-omics""
Slides and vignette for the Data Integration lecture at Universitat Pompeu Fabra (May 2020)
Single-cell data analysis: MSc Bioinformatics UPF
Pyro (probabilistic PyTorch) tests
Hugo Academic Theme
single-cell Nucleosome Methylation Transcription
single-cell multi-omics study of embryoid body differentiation
scNMT-seq gastrulation
scNMT-seq from Tet TKO chimeras
A single-cell RNAseq pipeline for 10X genomics data
Shiny app for the DNMT and TET KO cellular atlas
R Shiny app for the 10x Multiome mouse organogenesis project
R Shiny app to visualise gene expression during embryogenesis
Training material for single-cell analysis
Testing Stan MCMC and Variational Bayes capabilities
University of Cambridge PhD thesis
A repository to practice contributing to a Manubot manuscript
Analysis of Wang2021 mouse preimplantation scNOMeRe-seq data
Manubot for white paper