Comments (11)
Hi Tim,
Try using this ReadSet ID instead:
CMvnhpKTFhD04eLE-q2yxnU
Paul
from googlegenomics.
Hi Tim,
Below is what you should see for ReadSet ID CMvnhpKTFhD04eLE-q2yxnU
:
Hope it helps,
~p
from googlegenomics.
Great. Why not fix the default?
Statistics is the grammar of science.
Karl Pearson http://en.wikipedia.org/wiki/The_Grammar_of_Science
On Wed, Oct 29, 2014 at 5:59 PM, Paul Grosu [email protected]
wrote:
Hi Tim,
Below is what you should see for ReadSet ID CMvnhpKTFhD04eLE-q2yxnU:
[image: shiny]
https://cloud.githubusercontent.com/assets/6555937/4837097/dfd5b002-5fcf-11e4-9df6-4bd2f305f286.pngHope it helps,
~p—
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#12 (comment)
.
from googlegenomics.
I cannot fix it, since I would need to sign a CLA. Feel free to fix it via a PR :)
from googlegenomics.
Fair enough. Thanks for pointing out a solution :-)
--t
On Oct 29, 2014, at 7:46 PM, Paul Grosu [email protected] wrote:
I cannot fix it, since I would need to sign a CLA. Feel free to fix it via a PR :)
—
Reply to this email directly or view it on GitHub.
from googlegenomics.
Anytime and always happy to :) All of this is still in active development, so there are many places to add cool stuff.
~p
from googlegenomics.
Sorry for the delay, I just saw this.
I'm going to update the shiny app to use v1beta2, and I'll fix the readset ID at the same time.
from googlegenomics.
Cool! Thanks Cassie :)
from googlegenomics.
code is all fixed. but I can't update shiny atm, because it doesn't support R 3.1.2 yet :(
I'll see how hard it is to downgrade soon.
from googlegenomics.
No worries about 3.1.2 since it's still beta :) The minimum requirement is 3.1.0 based on line 11 of the DESCRIPTION file.
from googlegenomics.
Fixed!
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Related Issues (20)
- genome reference assembly extraction from variants/reads objects? HOT 4
- seqlevelsStyle oddities HOT 10
- improve performance HOT 8
- coding style HOT 19
- getting started confusion HOT 13
- Example code motivating seqlevelsStyle() patch HOT 1
- Improve messaging and instructions around authentication. HOT 4
- add retrying to all api methods
- streamline authorization HOT 1
- submit this package to BioConductor HOT 3
- Problem authenticating with invokeBrowser=F HOT 2
- Error [...] key 60 (char '<') not in lookup table HOT 4
- Document steps for new package releases HOT 4
- Port to native R support in Travis. HOT 19
- Might want to update to the new location... HOT 2
- Update Bioconductor converters to handle multi-allelic data and data with non-variant segments.
- Update Bioconductor variant converters to tolerate missing values.
- Update getVariants* calls to accept a variantSetId instead of datasetId HOT 1
- Add a method to reset the OAuth token. HOT 7
- variantsToVRanges loses sample/call information HOT 4
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