biocompute-objects Goto Github PK

-tool-type-dictionary

aluminum-in-infant-vaccines

R Safety Assessment Algorithm for Aluminum in Infant Vaccines

bco-app

BCO App by Seven Bridges

bco-public-website

A Hugo-based deployment of biocomputeobject.org

bco-ro-crate

Tutorial and specification for packaging IEEE 2791-2020 BCOs as RO-Crate Research Objects

bco-ro-example-chipseq

Packaging a IEEE 2791 described BioCompute Object as RO-Crate, using nf-core/chipseq as example

bco_api

The master repository for the JSON API.

bco_documentation

Repository for documentation to support the IEEE 2791-2020 standard. Please see our home page for communications/publications:

bco_editor

A web application that can be used to create and edit BioCompute objects based on BioCompute schema described in the BCO specification document.

bco_spec_v1.0

BioCompute Object (BCO) project is a collaborative and community-driven framework to standardize HTS computational data. 1. BCO Specification Document - user manual for understanding and creating BCOs - https://tinyurl.com/bco-spec 2. HTS-CSRS project website - https://hive.biochemistry.gwu.edu/htscsrs/ 3. Open Science Framework - https://osf.io/h59uh/[ResearchObject](http://www.researchobject.org/)

bcotool

biocompute

Create and Manipulate BioCompute Objects

biocompute-object-llm

BioCompute Object Assistant

biocompute-objects.github.io

Website redirection

biocomputeobjectcreatorcommandlinetool

checksum_tool

A repository for a BioCompute Object checksum generator.

commandlinelogger

Script to capture entry at the (Linux) command line.

dataset-bco

An example BCO for integrated dataset that is used as a readme for the dataset

dnanexus

examples

repo for BCO example flat files

extension-domain-examples

extension_domain

extension schema for BCO

galaxy

Data intensive science for everyone.

galaxy-to-bco

galaxy_server

Configuration for Galaxy Installation with Ansible in AWS for the BioCompute Project

galaxymetagenomics_v1.2

An example BCO created from a Galaxy Project instance

gw-smhs-bioc6223

Repository for BIOC-6223 Bioinformatics graduate students midterm project

hive_metagenomics

Example BCO for a metagenomics analysis on High-performance Integrated Virtual Environment (HIVE), a modern robust suite of software that provides an infrastructure for next-generation sequence (NGS) data analysis co-developed by Food and Drug Administration and George Washington University.

library

Standard library to support the IEEE 2791-2020 standard.

mockup