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Name: Bing Guo
Type: User
Company: University of Maryland School of Medicine
Location: MD, USA
Name: Bing Guo
Type: User
Company: University of Maryland School of Medicine
Location: MD, USA
BCF reader in pure Rust (https://docs.rs/bcf_reader/latest/bcf_reader/)
a Nextflow pipeline to benchmark IBD callers with empirical data by comparing IBD-based estimates with expected patterns of Plasmodium falciparum populations
a Nextflow pipeline to benchmark different IBD detection methods and optimize IBD caller-specific parameters by simulating Plasmodium falciparum-like genomes and using true IBD
A python package to facilitate identity-by-descent-based analysis
a Rust crate designed to facilitate the analysis of rare-variant sharing and identity-by-descent (IBD) sharing.
Simulate genealogical trees and genomic sequence data using population genetic models
A collection of unexpected challenges and learnings with nextflow and nf-core.
Allow conversion of polars dataframes and series between rust and python (based on https://github.com/pola-rs/polars/tree/master/examples/python_rust_compiled_function)
Nextflow pipeline for analyzing empirical WGS data for the effect of positive selection on IBD-based inference
Nextflow pipeline to assess the impact of positive selection on Identity by Descent (IBD)-based inferences, utilizing population genetic simulations and true IBD inferences.
This is the development home of the Snakemake wrapper repository, see
Nextflow pipeline for plasmodium SNP calling
A series of Python Jupyter notebooks that help you better understand "The Elements of Statistical Learning" book
Calculate IBD segments from tree sequence using tskit C API
Analyse, create and manipulate tree sequences.
Rust bindings for the tskit library
Mask genotype calls when allele depth per sample is too small
A package for handling whole genome alignments by Pádraic Corcoran and Henry Barton
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.