Related Issues (20)
- fgrep (grep -F) option HOT 1
- Unused tool parameters
- Compound conversion: Add index to output HOT 12
- Missing PAF file format for the overlaps in the wrapper HOT 4
- License HOT 1
- Chemfp not found
- add repeat elements to tp_find_and_replace HOT 3
- Format of Search CV parameters HOT 12
- Add more information to the help section. HOT 1
- Salmon doesn't work correctly with paired-end reads
- cut tool improvements HOT 1
- Split file to collection to tool fails with >1024 files HOT 8
- Update or replace link in help section of tp_awk_tool HOT 1
- Integration of a few BioModels (ML models)
- agat_sp_keep_longest_isoform.pl needed
- Many tools specify `format="text"` as data inputs or outputs
- Genbank file is not optional HOT 4
- New version of grep fails if pattern isn't found HOT 1
- Viz plugin requiring multiple datasets as input
- `Split file` doesn't include header in last dataset when called on rows HOT 3
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