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This pipeline allows to call mobile genes SNVs and compute popGen metrics of interest from mobile gene alignment with samples metagenomic reads.
This repository contains a script for analyzing SARS-CoV-2 evolution in epitopes during the first two waves of the COVID-19 pandemic. The immunological data come from a high protein density array analysis of SARS-CoV-2 epitopes in 15 patients (N'Guessan A. et al., 2022). This script and the related data can be updated manually to integrate data from other waves or other sets of epitopes.
Scripts and data used for analyzing the spread of SARS-CoV-2 haplotypes worldwide during the first and second waves (2020)
This repository contains the script to parse single-cell RNA-sequencing data and perform downstream analyses like variance partitioning and eQTL mapping
Forward-time simulator for large-scale population dynamics and molecular evolution including pangenome evolution
This repository contains a suite of tools for analyzing within-sample genetic diversity of SARS-CoV-2 in Wastewater (WW) samples
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.