Comments (7)
Can you try this:
mamba create -n prokka
mamba activate
conda config --env --set subdir osx-64
mamba install -c conda-forge -c bioconda prokka
mamba activate prokka
from genomad.
The problem is that there's no pre-compiled binary of Aragorn in Conda for Apple processors. You can try to following the installation instructions here: #36 (comment)
from genomad.
Thank you very much for your advice. Unfortunately, even when trying to use the commands you suggested, I didn't get any results. The response is:
Could not solve for environment specs
The following package could not be installed
ββ prokka is not installable because it requires
ββ aragorn >=1.2 , which does not exist (perhaps a missing channel).
from genomad.
What are the exact commands you are using?
from genomad.
from genomad.
from genomad.
No worries :)
You might want to check out Bakta. As far as I know, Prokka is not being maintained anymore
from genomad.
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