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Antônio Camargo's Projects

2022-pths-rna-seq-analysis icon 2022-pths-rna-seq-analysis

RNA-Seq analysis for "Transcription Factor 4 loss-of-function is associated with deficits in progenitor proliferation and cortical neuron content"

anvio icon anvio

An analysis and visualization platform for 'omics data

cibuildwheel icon cibuildwheel

🎡 Build Python wheels on CI with minimal configuration.

clust icon clust

Automatic and optimised consensus clustering of one or more heterogeneous datasets

cmap icon cmap

Scientific colormaps for python, with only numpy dependency

cobra.github.io icon cobra.github.io

A tool to raise the quality of viral genomes assembled from short-read metagenomes via resolving and joining of contigs fragmented during de novo assembly.

cortical-organoids-reanalysis icon cortical-organoids-reanalysis

Reanalysis of the "cortical.organoids" dataset from "Complex Oscillatory Waves Emerging from Cortical Organoids Model Early Human Brain Network Development"

dbmap icon dbmap

A fast, accurate, and modularized dimensionality reduction approach based on diffusion harmonics and graph layouts. Escalates to millions of samples on a personal laptop. Adds high-dimensional big data intrinsic structure to your clustering and data visualization workflow.

docker-builds icon docker-builds

:package: :whale: Dockerfiles and documentation on tools for public health bioinformatics

enrichm icon enrichm

Toolbox for comparative genomics of MAGs

furo icon furo

A clean customizable documentation theme for Sphinx

galah icon galah

More scalable dereplication for metagenome assembled genomes

genomad icon genomad

geNomad: Identification of mobile genetic elements

homebrew-core icon homebrew-core

🍻 Default formulae for the missing package manager for macOS

icons icon icons

Named, vector icons for elementary OS

kcounter icon kcounter

A simple package for counting DNA k-mers in Python. Written in Rust.

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