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tree_nine

Put diff files on an existing phylo tree using UShER and taxonium tools.

ttt

Tweak Terra's TSVs -- A toolkit for modifying data tables used by terra.bio

tutorials

Contains resources associated with documentation and tutorials. Not very useful out of context.

untar

Decompress a tarball with WDL

upon-thine-inputs

Example WDL that directly modifies an input file. Demonstrates possible permissions issues.

usher

Ultrafast Sample Placement on Existing Trees

usher_wiki

docs holder for usher wiki

vcf_to_diff_wdl

Convert a VCF into a diff file for usage with UShER.

vcfhunk

Examine little parts of a big VCF file. Only useful for debugging and file comparsion.

vcftogds-archive

Convert Vcf files to Gds format

verbose-fiesta

Scraps of documentation for various projects. The github suggested repo name was too relevant to my documentation style not to use it.

wdl_workflows_guide

xyalign_ac3