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Name: Ash O'Farrell
Type: User
Company: Genomics Institute, UC Santa Cruz
Location: Santa Cruz (via Ireland's Ancient East)
Name: Ash O'Farrell
Type: User
Company: Genomics Institute, UC Santa Cruz
Location: Santa Cruz (via Ireland's Ancient East)
CWL for running analysis pipeline scripts as workflows
A classic.
Templates for checker WDLs.
WDLization of clockwork
WDLized version of covstats from goleft. Get coverage, read length, and more from bam or cram files.
Simulate cross-sample-contamination by mixing fastq reads from two samples
Scientific workflow engine designed for simplicity & scalability. Trivially transition between one off use cases to massive scale production environments
Decon-taminate your Mycobacterium tuberculosis complex fastqs
Highlight the differences between genomic diff files by "aligning" them by position
An unofficial dictionary for Dockstore.
The documentation for Dockstore.org
Website user interface for Dockstore in Angular2
bug testing. this fork will probably be deleted at some point.
A place for tutorials and other documentation for DataSTAGE platforms
Never, ever do this
WDLization of some of enaBrowserTools
Test repository. Contents subject to change without notice!
WDLization of fastp.
fastqc, but in WDL
Really basic script to parse a json and download the gs:// schemas for google bucket files within.
An efficient FASTQ manipulation suite
CWL descriptions for FragPipe Proteomics Pipline
A fresh repository full of foo.
Official code repository for GATK versions 4 and up
Workflows for processing high-throughput sequencing data for variant discovery with GATK4 and related tools
HubFlow: A Git extension to make it easy to use GitFlow with GitHub. Based on the original gitflow extension for git.
Create a plaintext or RST glossary using Python
Collection of miscellanous WDLized goleft functions.
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.