Introduction to Biological Network Analysis and Visualization

May 2016 @The Scripps Research Institute

Keiichiro Ono (UC, San Diego Dept of Medicine)

This repository contains all course materials for the lecture.

• Lecture 1: Introduction to Cytoscape
• Lecture 2: Building workflows with Jupyter Notebook and py2cytoscape

All recture notes and handouts.

Data sets and sample Cytoscape files used in the 1st lecture.

Jupyter Notebooks for the 2nd lecture.

Data files and instructions for your homework.

Please send your questions to kono at ucsd edu.

Documents can be re-distributed under CC BY 4.0.

Source code is licensed under the MIT License.