This is an absurdist exercise to create a Polygenic score for Gross Domestic Product. Basically what I lay out here is a GWAS using publicly available Arabdiopsis thaliana genome data and country-of-origin GDP as my phenotype
If you want to run this on your own machine, I'd recommend
setting up a new environment in using conda
and then
using the provided requirements.
The simplest way you could do this if you already have
conda
installed would be
conda create --name gdp --file requirements/conda.txt
that should set up the conda
environment for you to run
the notebook I've provided.
The idea for GWAS on GDP came from my troll-like muse, Matt Hahn