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A collection of computer vision projects for Acute Lymphoblastic Leukemia classification/early detection.

Home Page: https://www.petermossamlallresearch.com/research/

License: MIT License

Python 3.47% Jupyter Notebook 96.51% Shell 0.02%
artificial-intelligence artificial-neural-networks artificial-intelligence-algorithms computer-vision convolutional-neural-networks deep-neural-networks lymphoblastic-leukemia-classifiers intel-movidius caffe fastai

all-classifiers-2019's People

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all-classifiers-2019's Issues

Keras model based on the ACUTE LEUKEMIA CLASSIFICATION USING CONVOLUTION NEURAL NETWORK IN CLINICAL DECISION SUPPORT SYSTEM paper

Is your feature proposal related to a problem? Please describe.
No

Describe the solution you'd like to submit
Create a Keras classifier based on the ACUTE LEUKEMIA CLASSIFICATION USING CONVOLUTION NEURAL NETWORK IN CLINICAL DECISION SUPPORT SYSTEM paper.

Create ALL_IDB1 & ALL_IDB2 versions.

Describe alternatives you've considered
Other types of classifiers: Tensorflow/Theano etc

Additional context
NA

Movidius Inception Classifier

Trainer, classifier and tutorial using the dataset from the Python Data Augmentation tutorial, Intel AI DevCloud for training and Movidius / UP2 for inference.

Augmentation upgrade

  • Update augmentation to latest version.
  • Change background color of augmented images (rotated and translated)
  • Update augmentation banner to show new augmentations

Change contributors section in page footers

Is your feature proposal related to a problem? Please describe.
Currently no place for Student Program contributors in the page footers.

Describe the solution you'd like to submit

  • Split the contributors section at the bottom of pages in the footer into two categories:
    -- Team
    -- Students & Research Interns

  • Add Taru to Students & Research Intern contributors

Describe alternatives you've considered (If any)
NA

Additional context
NA

KeyError: 'layerFile' issue

Describe the bug
While following the steps as mentioned in the article- https://software.intel.com/en-us/articles/detecting-acute-lymphoblastic-leukemia-using-caffe-openvino-neural-compute-stick-2-part-1?fbclid=IwAR15wmR-qw10GfVuaswuLV6RGcPqx3PLyXY8x1gLEv_ijdyxjkfwOHcapQA , I tried running the command to check the Network configuration using python Info.py NetworkInfo, and that's when I got the error. Logs provided in later section.

To Reproduce
Steps to reproduce the behavior:

  1. Follow the steps up till installing any requirements using Setup.sh and then check the network config.
  2. See error

Expected behavior
Should have worked as intended,i.e. show the network being created properly.

Actual behavior
python Info.py NetworkInfo
2019-03-20 23:31:51|allCNN|Status: Init complete
Traceback (most recent call last):
File "Info.py", line 177, in
main(sys.argv[1:])
File "Info.py", line 155, in main
allCNN.loadCaffeNet()
File "Info.py", line 62, in loadCaffeNet
self.net = caffe.Net(self.confs["Settings"]["Classifier"]["layerFile"], caffe.TEST)

Desktop (please complete the following information):

  • OS: [Ubuntu 16.04 LTS]
  • Hardware: [UP2 Board]

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