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parflow_python_shortcourse's Introduction

Python based ParFlow short course

This short course provides an introduction to ParFlow. All of the exercises provided here use the python interface for ParFlow. If you prefer to work through the tcl interface you can refer to these basic and advanced short course repos.

Table of Contents

ParFlow Examples Contained in this repo

  1. Little Washita ParFlow Simulations: These exercises walk through a variety of simulation configurations for the Little Washita watershed. All script are setup just to build and run the Parflow simulation. Refer to the pre and post processing list for examples of creating inputs and evaluating outputs.

  2. Little Washita Pre and Post Processing Examples:

Additional Training Resources

In addition to this short course there are multiple other ways to learn more about ParFlow and connect with the community we encourage you to check out these resources.

Setting up your run enviroment

If you are working with ParFlow through the python interface you will need two things (1) the actual ParFlow model, you can build this locally or run it through a Docker and (2) the python tools for interacting with ParFlow.

The easiest way to work through the materials of this short course is to follow the quick start instructions which point you to a Docker which includes ParFlow along with all the python packages you will need.

As you work more with ParFlow though you may want more control over your enviroment and to have your own builds. If this is you, see the notes below for other options for running parflow and for the python packages you will want to install.

1. Quick start

The quickest way to jump in and work through these exercises is to start from our docker setup. This includes ParFlow in addition to all of the python packages you will need for the short course.

  1. Clone this repository to your local machine.

    git clone {path to this repo}
    

    If you are new to GitHub you will first need to make sure you have GitHub installed. There are lots of great resources online to learn more aobut Git and GitHub one good place to start is the GitHub Documentation

  2. If you don't already install Docker from here.

  3. When you launch the Docker it will just have access to the directory you launch it from and every directory below it. So the first step is to open a terminal windo and navigate to the directory that you cloned the short course into

  4. Next run the following command from your terminal on mac / linux:

    docker run --rm -it -p 8888:8888 -v $(pwd):/data reedmaxwell/parflowjupyter
    

    and run this command on Windows:

    docker run --rm -it -p 8888:8888 -v %cd%:/data reedmaxwell/parflowjupyter
    

This will launch a notebook server with access to the directory you are in and every one below it. If you get a 404 error or file not found you might have this issue.

  1. After you run the previous command you should see outputs that look like this:
    To access the server, open this file in a browser:
        file:///root/.local/share/jupyter/runtime/jpserver-1-open.html
    Or copy and paste one of these URLs:
        http://0422cde8d804:8888/lab?token=bb8f1a6796cf090dfb01c06128b43b573f37feed649da96f
     or http://127.0.0.1:8888/lab?token=bb8f1a6796cf090dfb01c06128b43b573f37feed649da96f
    
    Open a browser window and copy and paste the last line that you get here into it. This should take you to a Jupyter notbook server and you should be able to see all the files in your directory here.

2. Other options for running parflow

ParFlow Docker

ParFlow docker (using TCL) and discussion is included in the ParFlow GitHub Repo: https://github.com/parflow/docker

Local ParFlow build

Local ParFlow build guides can be found in the ParFlow Wiki and the ParFlow Blog.

3. Python packages for ParFlow

Please see the requirements.txt for this repo.

parflow_python_shortcourse's People

Contributors

lecondon avatar callachennault avatar reedmaxwell avatar

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