ajitjohnson / arseq Goto Github PK

• installing source package ‘arseq’ ...
  ** using staged installation
  ** R
  ** data
  *** moving datasets to lazyload DB
  ** inst
  ** byte-compile and prepare package for lazy loading
  Error: .onLoad failed in loadNamespace() for 'rJava', details:
  call: dyn.load(file, DLLpath = DLLpath, ...)
  error: unable to load shared object '/Library/Frameworks/R.framework/Versions/3.6/Resources/library/rJava/libs/rJava.so':
  dlopen(/Library/Frameworks/R.framework/Versions/3.6/Resources/library/rJava/libs/rJava.so, 6): Library not loaded: /Library/Java/JavaVirtualMachines/jdk-11.0.1.jdk/Contents/Home/lib/server/libjvm.dylib
  Referenced from: /Library/Frameworks/R.framework/Versions/3.6/Resources/library/rJava/libs/rJava.so
  Reason: image not found
  Execution halted
  ERROR: lazy loading failed for package ‘arseq’
• removing ‘/Library/Frameworks/R.framework/Versions/3.6/Resources/library/arseq’
  Error: Failed to install 'arseq' from GitHub:
  (converted from warning) installation of package ‘/var/folders/4b/5tnljr4d2gl9x2lh7_wr71sm0000gp/T//RtmpPvgRoU/file6bb51331452a/arseq_1.0.11.tar.gz’ had non-zero exit status

row name skips due to size issues

When using the sample dataset given on your website and inherent to the package, an error is thrown:
Error in which(meta == groups[i], arr.ind = T)[1, ] :
subscript out of bounds

How can I get rid of this error and see the results?

I am trying to install and keep getting this error. Any solutions on how to fix this?