ahmedarslan Goto Github PK
Name: Ahmed Arslan
Type: User
Bio: Sr. Scientist. Previous: Scientist - S.B.P.S.D; Postdoc - Stanford Medicine; Ph.D - KU Leuven; M.S - Uppsala University.
Location: Belgium
Name: Ahmed Arslan
Type: User
Bio: Sr. Scientist. Previous: Scientist - S.B.P.S.D; Postdoc - Stanford Medicine; Ph.D - KU Leuven; M.S - Uppsala University.
Location: Belgium
An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)
Library to visualize protein sequence features in Typescript using D3. This repository is based on calipho-sib/feature-viewer.
R package for applying Gamma-Poisson regression to identify statistical enrichment or depletion of somatic mutations in regions after correcting for genomic covariates.
A grammar of graphics for comparative genomics
'ggplot2' Based Publication Ready Plots
A package to make streamplots
A declarative library for Python designed to create interactive multi-scale visualizations of genomics and epigenomics data.
A visualisation tool for the creation and analysis of graphs
Annotate non-coding regulatory vars using our GREEN-DB, prediction scores, conservation and pop AF
A comprehensive tutorial about GWAS and PRS
codes used in HbCGM_paper
A collection of tools for Hi-C data analysis
Hifiasm: a haplotype-resolved assembler for accurate Hifi reads
Copy number variant caller and depth visualization utility for PacBio HiFi reads
Various algorithms for analysing genomics data
A module for improving the insertion sequences of structural variant calls
MIP based joint inference of copy number and rearrangement state in cancer whole genome sequence data.
Deep learning infrastructure for bioinformatics
igv.js standalone page generator and automatic configuration to view bam/cram/vcf/bed. "working in under 1 minute"
Kinase in action.
catalog for long-read sequencing tools
STAR based ENCODE Long RNA-Seq processing pipeline
Amplicon sequencing pipelines suitable for SSU (16S, 18S), LSU (23S, 28S) and ITS.
Codes for the Iso-Seq variant-calling paper
Color palette package in R inspired by works at the Metropolitan Museum of Art in New York
A versatile pairwise aligner for genomic and spliced nucleotide sequences
Missing data visualization module for Python.
Machine Learning for Genomics and Therapeutics Resources (Cell Patterns)
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.