reorder_mod() error about bctpy HOT 4 CLOSED

Hi Ralf, what version of bctpy are you using?
On Feb 5, 2016 10:26 AM, "rschmaelzle" [email protected] wrote:

Hi, am trying to reorder adjacency matrices by community-membership. I get
the error:

File "", line 9, in
[new_mat1, newmat2] = bct.reorder_mod(adj_time1234[:,:,i], my_comm.values());
File "/Users/Ralf/anaconda/lib/python2.7/site-packages/bct/utils/visualization.py", line 677, in reorder_mod
#if old == om[0]:
UnboundLocalError: local variable 'old' referenced before assignment

I compared the code to the matlab version but did not fully understand the
differences.
Best, Ralf.

—
Reply to this email directly or view it on GitHub
#35.

from bctpy.

HI roan,
thanks for the quick reply
pip freeze says its bctpy==0.4.1
If i try pip install --upgrade bctpy it says it is up to date. On github I
see there is 0.5.0 - should I install manually. Also, I cannot get version
from within python via bct.version
Sorry, but I am still a python beginner (coming from matlab)
best, ralf.

On Fri, Feb 5, 2016 at 10:34 AM, Roan LaPlante [email protected]
wrote:

Hi Ralf, what version of bctpy are you using?
On Feb 5, 2016 10:26 AM, "rschmaelzle" [email protected] wrote:

Hi, am trying to reorder adjacency matrices by community-membership. I
get
the error:

File "", line 9, in
[new_mat1, newmat2] = bct.reorder_mod(adj_time1234[:,:,i],
my_comm.values());
File
"/Users/Ralf/anaconda/lib/python2.7/site-packages/bct/utils/visualization.py",
line 677, in reorder_mod
#if old == om[0]:
UnboundLocalError: local variable 'old' referenced before assignment

I compared the code to the matlab version but did not fully understand
the
differences.
Best, Ralf.

—
Reply to this email directly or view it on GitHub
#35.

—
Reply to this email directly or view it on GitHub
#35 (comment).

from bctpy.

Can you send me the input matrix which caused this error? You can send it
to [email protected]

I don't recommend updating to the dev version right now. I hope to release
0.5.0 fully in about two weeks.

On Fri, Feb 5, 2016 at 10:43 AM, rschmaelzle [email protected]
wrote:

HI roan,
thanks for the quick reply
pip freeze says its bctpy==0.4.1
If i try pip install --upgrade bctpy it says it is up to date. On github I
see there is 0.5.0 - should I install manually. Also, I cannot get version
from within python via bct.version
Sorry, but I am still a python beginner (coming from matlab)
best, ralf.

On Fri, Feb 5, 2016 at 10:34 AM, Roan LaPlante [email protected]
wrote:

Hi Ralf, what version of bctpy are you using?
On Feb 5, 2016 10:26 AM, "rschmaelzle" [email protected] wrote:

Hi, am trying to reorder adjacency matrices by community-membership. I
get
the error:

File "", line 9, in
[new_mat1, newmat2] = bct.reorder_mod(adj_time1234[:,:,i],
my_comm.values());
File

"/Users/Ralf/anaconda/lib/python2.7/site-packages/bct/utils/visualization.py",
line 677, in reorder_mod

#if old == om[0]:
UnboundLocalError: local variable 'old' referenced before assignment

I compared the code to the matlab version but did not fully understand
the
differences.
Best, Ralf.

—
Reply to this email directly or view it on GitHub
#35.

—
Reply to this email directly or view it on GitHub
#35 (comment).

—
Reply to this email directly or view it on GitHub
#35 (comment).

from bctpy.

Reproduced and fixed now in development code.

from bctpy.