Related Issues (20)
- use speedyseq instead of phyloseq HOT 1
- vignette detailing general guidance for using covariates... HOT 3
- Can phylodivnet be added to betaDiversity vignette? HOT 5
- Problem with simplifyBeta() HOT 6
- Estimating Shannon Evenness with uncertainty and other parameters associated with diversity values HOT 1
- Cannot allocate vector of size with suspiciously large phyloseq object HOT 6
- simplifyBeta() missing functionality for aitchison distance HOT 3
- Error in default_network(sigma) HOT 5
- testBetaDiversity pseudo F-statistic calculation HOT 2
- Choice of base ASV and influence on reproducibility HOT 7
- rename master to main HOT 1
- code coverage audit HOT 2
- Diversity estimates not plausible HOT 16
- DivNet on rRNA gene counts derived from metagenomes? HOT 7
- R "killed" or cores not returning data HOT 4
- X covariate table and the intercept HOT 2
- DivNet on Transcripts per Million (TPM) values derived from metagenomic data HOT 4
- Is there a minimum number of samples required for testBetaDiversity?
- unit tests HOT 2
- problems with beta_diversity.Rmd HOT 12
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