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peptidebert

Transformer Based Language Model for Peptide Property Prediction

prollama

A Protein Large Language Model for Multi-Task Protein Language Processing

protein-sequence-models

proteinmpnn

Code for the ProteinMPNN paper

protllama

A LLama encoder trained on the protein language

protmamba-ssm

ProtMamba: a homology-aware but alignment-free protein state space model

protrek

ProTrek: Navigating the Protein Universe through Tri-Modal Contrastive Learning

saprot

Saprot: Protein Language Model with Structural Alphabet

simclr

PyTorch implementation of SimCLR: A Simple Framework for Contrastive Learning of Visual Representations

thesis

Multi-modal Protein-Protein Interaction Prediction using Graph Neural Networks and Protein Language Models in a Supervised Framework

unsupervised-speech-recognition-with-gans

Wav2Vec-U: Unsupervised Speech Recognition with GANs Re-implementation and enhancement of the GAN-based unsupervised speech recognition model, wav2vec-U. This project introduces self-supervised learning and adversarial training to autonomously segment unlabeled audio, achieving impressive results on benchmark datasets.