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Code and materials to reproduce graphics in "A generalized additive model approach to time-to-event analysis"

Home Page: https://zenodo.org/record/1048906

License: MIT License

TeX 97.13% R 2.87%
r rstats piece-wise-exponential generalized-additive-models survival-analysis time-to-event latex tutorial supplemental-materials

pammtutorial-smj's Introduction

Code and materials to reproduce graphics and analyses in "A generalized additive model approach to time-to-event analysis"

DOI

To reproduce the paper

  • run the graphics-tutorial.R script with the working directory set to the Paper folder

  • Build the pamtutorial.tex LaTeX file.

Notes

  • To reproduce the results you will need to install the pammtools package. (At the moment of this writing we used release version v0.0.3.2: https://github.com/adibender/pammtools/releases/tag/v0.0.3.2)

  • The code to install v0.0.3.2 version of the pammtools package is already contained in the graphics-tutorial.R script

  • In the link above, you will also find zipped files of the package source code as well as installable binaries for linux/mac and windows

  • For completeness the installable packages for linux/mac and windows are also contained in this folder

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