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View Code? Open in Web Editor NEWMAGqual is a command line tool to evaluate the quality of metagenomic bins and generate recommended metadata in line with the MIMAG standards
License: MIT License
MAGqual is a command line tool to evaluate the quality of metagenomic bins and generate recommended metadata in line with the MIMAG standards
License: MIT License
There's a new bakta version and new databases.
Need to update the version in the conda envs and also the download links for the databases.
Need to add and test the capabilities of CheckM2.
Add functionality for more input bin types.
CheckM requires -X
flag if the file format is not fasta, so need to add option in workflow and also the python script.
Not previously an issue but SemiBin produces gzipped fasta bins.
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