Name: ABUBAKARI ABDUL WASID
Type: User
Company: Institute Pasteur of Shanghai, UCAS
Bio: I am a Master's student in Microbiology at the Institute Pasteur of Shanghai, under the University of Chinese Academy of Sciences (UCAS).
Location: China
flye
De novo assembler for single molecule sequencing reads using repeat graphs
free-programming-books
:books: Freely available programming books
gatb-minia-pipeline
GATB Minia assembly pipeline
gemma
Genome-wide Efficient Mixed Model Association
genomics
Sphinx documentation source for a computational genomics tutorial.
getting-started-with-genomics-tools-and-resources
Unix, R and python tools for genomics and data science
ggplot2
An implementation of the Grammar of Graphics in R
ggthemes
Additional themes, scales, and geoms for ggplot2
googlesheets4
Google Spreadsheets R API (reboot of the googlesheets package)
gwa_tutorial
A comprehensive tutorial about GWAS and PRS
h3agwas
GWAS Pipeline for H3Africa
harvest
hts-specs
Specifications of SAM/BAM and related high-throughput sequencing file formats
introduction-to-datascience
Open Source Textbook for DSCI100: Introduction to Data Science
introduction-to-datascience-python
python version of the ubc dsci100 textbook
ipython
Official repository for IPython itself. Other repos in the IPython organization contain things like the website, documentation builds, etc.
kraken_db_install_scripts
Updated Kraken DB install scripts to cope with new-ish NCBI structure
lab_2021
Repository for all the labs for Spring 2021
labs
Rmd source files for the HarvardX series PH525x
learning-bioinformatics-at-home
resources for learning bioinformatics
learning-resource-links
An awesome list of learning resources for bioinformatics, genomics and computational biology
machine-learning-specialization-andrew-ng
A collection of notes and implementations of machine learning algorithms from Andrew Ng's machine learning specialization.
matplotlib
matplotlib: plotting with Python
moderndive_book
Statistical Inference via Data Science: A ModernDive into R and the Tidyverse
mtrc-gwas
Code to reproduce analyses in Ma and Mortimer et al., 2020 ("Adaptation to the cervical environment is associated with increased antibiotic susceptibility in Neisseria gonorrhoeae").
mummer
Mummer alignment tool
ncbi-genome-download
Scripts to download genomes from the NCBI FTP servers
ncbi_fastq_downloader.sh
This is a pipeline for fastq download from sra
ngs-scripts
Some scripts/ no warranty, check before you use them
oneliners
Useful bash one-liners for bioinformatics.
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
Django
The Web framework for perfectionists with deadlines.
Laravel
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
Microsoft
Open source projects and samples from Microsoft.
Google
Google ❤️ Open Source for everyone.
Alibaba
Alibaba Open Source for everyone
D3
Data-Driven Documents codes.
Tencent
China tencent open source team.
