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marinefoodwebssmallworld's Introduction

R Code and data for the paper: The Architecture of Marine Food Webs: to be or not be a ‘small-world’

Abstract

Tomás Ignacio Marina ^1^ ^2^ ^3^, Leonardo A. Saravia ^2^ ^3^, Georgina Cordone ^1^ ^2^, Vanesa Salinas ^1^ ^2^, Santiago Doyle ^2^ and Fernando R. Momo ^2^ ^3^.

  1. Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Argentina

  2. Instituto de Ciencias, Universidad Nacional de General Sarmiento, Los Polvorines, Argentina

  3. INEDES, Universidad Nacional de Luján, Luján, Argentina

R Markdown files description

  • Fit_degree.Rmd:

      Fit degree distributions by maximun likelihood using powerlaw package 
      Calculate Small-world-ness and with package igraph following Humphries2008
      Calculate SW following our new method.
    

Folders

| 
|--- R: R code by L. Saravia
     |
     |--- powerlaw: R code by Cosma Rohilla Shalizi

Software Licence

The MIT License

Copyright 2017 Leonardo A. Saravia

Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation files (the "Software"), to deal in the Software without restriction, including without limitation the rights to use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies of the Software, and to permit persons to whom the Software is furnished to do so, subject to the following conditions:

The above copyright notice and this permission notice shall be included in all copies or substantial portions of the Software.

THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.

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