zuber-bioinfo Goto Github PK

awesome-genome-visualization

A list of interesting genome browser or genome-browser-like implementations

biocluster

Tutorial on building a computing cluster for bioinformatics

bioinfokit

Bioinformatics data analysis and visualization toolkit

bioinformatics-hacks

Scripts for miscelleneous bioinformatics tasks

bioinformatics-sh-wf-cd

Bioinformatics analysis scripts, workflows, general code examples

bioinformatics-workshops

Workshops presented by the Gladstone Bioinformatics Core

cmash

Fast and accurate set similarity estimation via containment min hash

dragonstar2019

Genomics_human_genome_course

facets

Algorithm to implement Fraction and Copy number Estimate from Tumor/normal Sequencing.

h3abionet16s

H3ABioNet 16S rDNA diverstity analysis package

improve16siontorrent

Scripts for 16S analysis from Ion Torrent data

intervar

A bioinformatics software tool for clinical interpretation of genetic variants by the 2015 ACMG-AMP guideline

mmg434

ngs-for-nipt

R script for Non-invasive prenatal testing

p3_assembly

rna-seq

RNA-seq analysis pipeline based on Snakemake

semester-biology

soap3-dp

To tackle the exponentially increasing throughput of Next-Generation Sequencing (NGS), most of the existing short-read aligners can be configured to favor speed in trade of accuracy and sensitivity. SOAP3-dp, through leveraging the computational power of both CPU and GPU with optimized algorithms, delivers high speed and sensitivity simultaneously.

taxcollector

16S rRNA database

training-collection

Collection of bioinformatics training materials

training-material

A collection of Galaxy-related training material

ts

Torrent Suite

variant_calling_in_cancer_genomes_seminar

Variant Calling in Cancer Genomes

windows-subsystem-for-linux-setup-guide

An in-depth Guide for getting started with the Windows Subsystem for Linux!

yt-channels-ds-ai-ml-cs

A comprehensive list of 180+ YouTube Channels for Data Science, Data Engineering, Machine Learning, Deep learning, Computer Science, programming, software engineering, etc.